DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and Clec3a

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:124 Identity:34/124 - (27%)
Similarity:55/124 - (44%) Gaps:8/124 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 YIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAFY 121
            |:......::.:|...|......|....:..|:.||..|.|......|| ||:..||:.|||.|.
  Rat    79 YLASEGLKHYHEANEDCISKGGTLVVPRNSDEINALRDYSKRSLPGVND-FWLGINDMVTEGKFL 142

  Fly   122 WMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMF--ATREMINDANCKIQMLYVCEATEP 178
            .: :|..:::..|:  :..|.. |..|||| :|  :.:...:|..|:....|:||...|
  Rat   143 DV-HGFAVSFLNWD--RAQPSG-GKRENCV-LFSQSAQGKWSDEACRSSKRYICEFIIP 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 31/118 (26%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 32/119 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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