DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and Mrc1

DIOPT Version :10

Sequence 1:NP_572491.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001099593.2 Gene:Mrc1 / 291327 RGDID:1309353 Length:1456 Species:Rattus norvegicus


Alignment Length:156 Identity:43/156 - (27%)
Similarity:72/156 - (46%) Gaps:21/156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 PSEIDTTPFVRIGDNY------------YYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEAL 92
            |.|..|||..:..:::            |......|..||::...|:.:...||||:.|.|.:.:
  Rat   635 PPEPTTTPEPKCPEDWGTTSKTSMCFKLYAKGKHEKKTWFESRDFCKAIGGELASIKSKDEQQVI 699

  Fly    93 IKYMKAKGFKNNDYFWISGNDLG--TEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFA 155
            .:.:.:.| ..::.||: |...|  :|| |.| |:|.|::|..|...:  |:||...|.|..:..
  Rat   700 WRLITSSG-SYHELFWL-GLTYGSPSEG-FTW-SDGSPVSYENWAYGE--PNNYQNVEYCGELKG 758

  Fly   156 TREMI-NDANCKIQMLYVCEATEPKT 180
            ...|. ||.||:....::|:..:.||
  Rat   759 DPGMSWNDINCEHLNNWICQIQKGKT 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_572491.1 CLECT 55..174 CDD:153057 35/133 (26%)
Mrc1NP_001099593.2 beta-trefoil_Ricin_MRC1 23..145 CDD:467785
FN2 161..209 CDD:128373
CLECT 234..342 CDD:153057
CLECT 362..487 CDD:214480
CLECT 504..626 CDD:214480
CLECT 659..779 CDD:153057 36/125 (29%)
CLECT 802..923 CDD:214480
CLECT 944..1079 CDD:214480
CLECT 1096..1212 CDD:214480
CLECT 1229..1355 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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