DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and Bcan

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_038957712.1 Gene:Bcan / 25393 RGDID:2194 Length:890 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057
BcanXP_038957712.1 Ig 40..158 CDD:416386
Ig strand A' 44..46 CDD:409353
Ig strand B 50..58 CDD:409353
Ig strand C 75..81 CDD:409353
Ig strand C' 86..89 CDD:409353
Ig strand D 107..112 CDD:409353
Ig strand E 118..124 CDD:409353
Ig strand F 132..139 CDD:409353
Ig strand G 149..158 CDD:409353
Link_domain_CSPGs_modules_1_3 156..250 CDD:239594
Link_domain_CSPGs_modules_2_4 257..352 CDD:239597
fibronec_FbpA <369..629 CDD:411474
EGF 626..655 CDD:394967
CLECT 664..787 CDD:413318
CCP 791..848 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9084
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45888
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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