DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG12111 and Sftpd

DIOPT Version :9

Sequence 1:	NP_001259341.1	Gene:	CG12111 / 31796	FlyBaseID:	FBgn0030050	Length:	188	Species:	Drosophila melanogaster
Sequence 2:	NP_033186.1	Gene:	Sftpd / 20390	MGIID:	109515	Length:	374	Species:	Mus musculus

Alignment Length:	124	Identity:	41/124 - (33%)
Similarity:	59/124 - (47%)	Gaps:	9/124 - (7%)

- Green bases have known domain annotations that are detailed below.

  Fly    51 IGDNYYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLG 115
            :||..:......| .:..|...|:.....|||.....|..|:.:.:.|    :|...::|..|:|
Mouse   259 VGDKIFRTADSEK-PFEDAQEMCKQAGGQLASPRSATENAAIQQLITA----HNKAAFLSMTDVG 318

  Fly   116 TEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFATREMINDANCKIQMLYVCE 174
            |||.|.: ..|.|:.|:.| .|.: |:|.||.||||.:| |....||..|..|.|.:||
Mouse   319 TEGKFTY-PTGEPLVYSNW-APGE-PNNNGGAENCVEIF-TNGQWNDKACGEQRLVICE 373

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG12111	NP_001259341.1	CLECT	55..174	CDD:153057	37/118 (31%)
Sftpd	NP_033186.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	38..222
		Collagen	45..102	CDD:189968
		Collagen	129..>171	CDD:189968
		Surfac_D-trimer	223..267	CDD:286141	2/7 (29%)
		CLECT_collectin_like	261..374	CDD:153061	40/122 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm43824
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910