DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and Sftpa1

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_075623.2 Gene:Sftpa1 / 20387 MGIID:109518 Length:248 Species:Mus musculus


Alignment Length:171 Identity:43/171 - (25%)
Similarity:68/171 - (39%) Gaps:29/171 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GIPSL-AYLPDVNIFTNYRTEVYNGIPSEIDTT--------PFVRIGDNYYYIEPMNKVNWFQAA 70
            |:|.. |||.:     ..:|.:|. |..:|..|        ..:.:||..:.....: ||:....
Mouse    95 GLPGFPAYLDE-----ELQTALYE-IKHQILQTMGVLSLQGSMLSVGDKVFSTNGQS-VNFDTIR 152

  Fly    71 GACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPW- 134
            ..|.....|:|:..:..|.||:....|    |.|.|.::...:..|.|.|::: :|..:.|..| 
Mouse   153 EMCTRAGGHIAAPRNPEENEAIASITK----KYNTYPYLGVIEGQTPGDFHYL-DGASVNYTNWY 212

  Fly   135 -NGPKQMPDNYGGNENCVHMFATREMINDANCKIQMLYVCE 174
             ..|:..     |.|.||.|: |....||..|....|.:||
Mouse   213 PGEPRGR-----GKEKCVEMY-TDGKWNDKGCLQYRLAICE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 29/120 (24%)
Sftpa1NP_075623.2 Collagen 27..98 CDD:189968 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..100 2/4 (50%)
CLECT_collectin_like 136..248 CDD:153061 32/124 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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