DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and Sell

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_030108191.1 Gene:Sell / 20343 MGIID:98279 Length:387 Species:Mus musculus


Alignment Length:124 Identity:34/124 - (27%)
Similarity:55/124 - (44%) Gaps:14/124 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 YYYIE-PMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEG 118
            |:|.| ||   ||..|...|:.....|.:|::|.|:|    |::....|:..|:||....:|.  
Mouse    41 YHYSEKPM---NWENARKFCKQNYTDLVAIQNKREIE----YLENTLPKSPYYYWIGIRKIGK-- 96

  Fly   119 AFYWMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFATRE----MINDANCKIQMLYVC 173
            .:.|:...:.:|....|.....|:|....|:||.::..||    ..||..|..:...:|
Mouse    97 MWTWVGTNKTLTKEAENWGAGEPNNKKSKEDCVEIYIKRERDSGKWNDDACHKRKAALC 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 34/124 (27%)
SellXP_030108191.1 CLECT_selectins_like 39..157 CDD:153062 34/124 (27%)
EGF_CA 160..192 CDD:238011
CCP 197..255 CDD:153056
CCP 259..317 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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