DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and Reg3a

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_035389.1 Gene:Reg3a / 19694 MGIID:109408 Length:175 Species:Mus musculus


Alignment Length:185 Identity:45/185 - (24%)
Similarity:72/185 - (38%) Gaps:26/185 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LILTSVGIPSLAYLPDVNIFTNYRTEVYNGIPSEIDTTPFVRIGDNYY----YIEPMNKVNWFQA 69
            |:|.|:....|:.|  :.:|.....:....:||...:.|   :|...|    |...|...:||||
Mouse     5 LVLNSISWMLLSCL--LFVFQVQGEDFQKEVPSPRTSCP---MGYKAYRSHCYALVMTPKSWFQA 64

  Fly    70 AGAC-RMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGND--LGTE---GAFYWMSNGRP 128
            ...| :..:.||.||....|...:...:..: ..|....||..:|  :|.:   |.:.| ||...
Mouse    65 DLVCQKRPSGHLVSILSGGEASFVSSLVNGR-VDNYQDIWIGLHDPTMGQQPNGGGWEW-SNSDV 127

  Fly   129 MTYAPWNGPKQMPDNYGGNENCVHMFATREMINDANCKIQMLYVCEATEPKTFKF 183
            :.|..|:|......|.|   :|..:.|:...:...:      |.|:.|.|...||
Mouse   128 LNYLNWDGDPSSTVNRG---HCGSLTASSGFLKWGD------YYCDGTLPFVCKF 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 30/128 (23%)
Reg3aNP_035389.1 CLECT 40..173 CDD:295302 35/146 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.