DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and VCAN

DIOPT Version :10

Sequence 1:NP_572491.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_004376.2 Gene:VCAN / 1462 HGNCID:2464 Length:3396 Species:Homo sapiens


Alignment Length:124 Identity:36/124 - (29%)
Similarity:51/124 - (41%) Gaps:12/124 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GDNYYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGT 116
            |..|.|.  .::..|..|...||:..|||.||....|.    .::...|   :||.||..||...
Human  3178 GQCYKYF--AHRRTWDAAERECRLQGAHLTSILSHEEQ----MFVNRVG---HDYQWIGLNDKMF 3233

  Fly   117 EGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENC-VHMFATREMINDANCKIQMLYVCE 174
            |..|.| ::|..:.|..|. |.|....:...|:| |.::......||..|...:.|.|:
Human  3234 EHDFRW-TDGSTLQYENWR-PNQPDSFFSAGEDCVVIIWHENGQWNDVPCNYHLTYTCK 3290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_572491.1 CLECT 55..174 CDD:153057 34/119 (29%)
VCANNP_004376.2 Ig_Versican 26..152 CDD:409482
Ig strand A 26..29 CDD:409482
Ig strand A' 32..34 CDD:409482
Ig strand B 38..46 CDD:409482
Ig strand C 63..69 CDD:409482
Ig strand C' 80..83 CDD:409482
Ig strand D 101..106 CDD:409482
Ig strand E 112..118 CDD:409482
Ig strand F 126..133 CDD:409482
Ig strand G 143..152 CDD:409482
Link_domain_CSPGs_modules_1_3 150..244 CDD:239594
Link_domain_CSPGs_modules_2_4 251..346 CDD:239597
GAG-alpha (glucosaminoglycan attachment domain) 348..1335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..439
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..622
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 807..829
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1126..1154
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1277..1316
GAG-beta 1336..3089
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1420..1497
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1510..1539
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1717..1737
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1759..1789
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1962..1994
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2107..2134
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2168..2188
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2371..2396
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2445..2473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2493..2518
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2598..2617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2834..2856
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2881..2905
EGF_CA 3091..3125 CDD:238011
EGF_CA 3127..3163 CDD:238011
CLECT_CSPGs 3169..3292 CDD:153058 36/124 (29%)
CCP 3296..3352 CDD:153056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3371..3396
Blue background indicates that the domain is not in the aligned region.

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