DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and vcana

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_021331663.1 Gene:vcana / 116993 ZFINID:ZDB-GENE-011023-1 Length:8936 Species:Danio rerio


Alignment Length:158 Identity:48/158 - (30%)
Similarity:65/158 - (41%) Gaps:21/158 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VNIFTNYRTEVYNGIPSEIDTT-------PFVRIGDNYYYIEPMNKVNWFQAAGACRMMNAHLAS 82
            :|.||......|.|...|.||.       .|.  |..|.|..  ::.||..|...||:..|||||
Zfish  8675 LNSFTCLCLPSYAGALCEQDTETCSYGWHKFQ--GHCYKYFP--HRRNWDTAERECRLQGAHLAS 8735

  Fly    83 IEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGN 147
            :....|.:    |:...|   :||.||..||...|..|.| ::||.:.|..|. |.|....:...
Zfish  8736 VLSHDEQQ----YINRLG---HDYQWIGLNDKMFENDFRW-TDGRVVQYENWR-PNQPDSFFSSG 8791

  Fly   148 ENCVHMFATRE-MINDANCKIQMLYVCE 174
            |:||.|....: ..||..|...:.:.|:
Zfish  8792 EDCVVMIWHEDGQWNDVPCNYHLTFTCK 8819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 37/119 (31%)
vcanaXP_021331663.1 Ig 36..148 CDD:325142
Link_domain_CSPGs_modules_1_3 147..241 CDD:239594
Link_domain_CSPGs_modules_2_4 249..343 CDD:239597
Herpes_BLLF1 <5897..>6290 CDD:330317
EGF 8622..8652 CDD:306513
EGF_CA 8656..8692 CDD:238011 5/16 (31%)
CLECT_CSPGs 8698..8821 CDD:153058 40/135 (30%)
CCP 8825..8881 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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