DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and Clec4f

DIOPT Version :10

Sequence 1:NP_572491.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_446205.1 Gene:Clec4f / 114598 RGDID:621062 Length:550 Species:Rattus norvegicus


Alignment Length:131 Identity:43/131 - (32%)
Similarity:61/131 - (46%) Gaps:22/131 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GDNYYYIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGT 116
            |..||:  ..:|.:|.:|...|....|||||:..:.|...|::...|.     |: ||...|.||
  Rat   421 GKFYYF--SRDKKSWHEAENFCVSQGAHLASVTSQEEQAFLVQITNAV-----DH-WIGLTDQGT 477

  Fly   117 EGAFYWMSNGRPMTYAP----WNGPKQMPDNY----GGNENCVHMFATREMINDANCKIQMLYVC 173
            ||.:.|: :|.|..|..    |.  |..|||:    |..|:|||:   :.|.||..|.....:||
  Rat   478 EGNWRWV-DGTPFDYVQSRRFWR--KGQPDNWRHGNGEREDCVHL---QRMWNDMACGTAYNWVC 536

  Fly   174 E 174
            :
  Rat   537 K 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_572491.1 CLECT 55..174 CDD:153057 41/126 (33%)
Clec4fNP_446205.1 SMC_prok_B <100..390 CDD:274008
CLECT_DC-SIGN_like 414..538 CDD:153060 43/131 (33%)
Blue background indicates that the domain is not in the aligned region.

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