DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and LOC100496055

DIOPT Version :10

Sequence 1:NP_572491.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_017951541.1 Gene:LOC100496055 / 100496055 XenbaseID:XB-GENE-29082979 Length:281 Species:Xenopus tropicalis


Alignment Length:118 Identity:32/118 - (27%)
Similarity:53/118 - (44%) Gaps:8/118 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 YIEPMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKAKGFKNNDYFWISGNDLGTEGAFY 121
            |:....:..:..|...|......|||    |..:|..|.:.....:.|....:..:|...||.|.
 Frog   170 YVTNGEEATYEDAKATCTKAEGQLAS----PMNDAENKAISILSLQYNKPVVLGIDDKQNEGTFK 230

  Fly   122 WMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFATREMINDANCKIQMLYVCE 174
            :::|.: :.::.|. |.: |:|..|.|:||.: .|..:.||.||..:.|.|||
 Frog   231 YLNNEK-IVFSNWK-PGE-PNNDNGVEDCVEL-RTNGIWNDMNCNSKRLTVCE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_572491.1 CLECT 55..174 CDD:153057 30/116 (26%)
LOC100496055XP_017951541.1 gly_rich_SclB <38..>123 CDD:468478
Surfac_D-trimer 129..174 CDD:286141 1/3 (33%)
CLECT 167..280 CDD:470576 32/118 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.