DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12111 and mrc1

DIOPT Version :10

Sequence 1:NP_572491.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_012821081.2 Gene:mrc1 / 100493504 XenbaseID:XB-GENE-494275 Length:1450 Species:Xenopus tropicalis


Alignment Length:144 Identity:44/144 - (30%)
Similarity:62/144 - (43%) Gaps:18/144 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NGIPS-EIDTTPFVRIGDNYYYIE----PMNKVNWFQAAGACRMMNAHLASIEDKPEMEALIKYM 96
            :.:|. |:.:..::...||.|:|.    .|:|...|     |:.....|..|.|..|.:.|.:|:
 Frog   789 SSVPEYELTSDGWIANKDNQYFISTEIVAMDKAREF-----CKKNFGDLVVINDDTERKFLWRYI 848

  Fly    97 KAKGFKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGN-ENCVHMFATREMI 160
            ...| |.:.||  .|..||.:..|.|| :|..|.|..|   .....|:..| ||||.|:......
 Frog   849 LKNG-KESAYF--IGLTLGLDREFRWM-DGSVMNYVAW---ASYEPNFANNDENCVVMYKNMGFW 906

  Fly   161 NDANCKIQMLYVCE 174
            ||.||.....|:||
 Frog   907 NDINCGYPNPYICE 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_572491.1 CLECT 55..174 CDD:153057 38/123 (31%)
mrc1XP_012821081.2 beta-trefoil_Ricin_MRC1 22..143 CDD:467785
FN2 159..207 CDD:128373
CLECT 227..339 CDD:153057
CLECT 359..483 CDD:214480
CLECT 501..623 CDD:214480
CLECT 643..775 CDD:470576
CLECT 799..920 CDD:214480 40/132 (30%)
CLECT 941..1076 CDD:214480
CLECT 1095..1209 CDD:214480
CLECT 1226..1355 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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