DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12111 and mbl2

DIOPT Version :9

Sequence 1:NP_001259341.1 Gene:CG12111 / 31796 FlyBaseID:FBgn0030050 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_571645.2 Gene:mbl2 / 100008009 ZFINID:ZDB-GENE-000427-2 Length:251 Species:Danio rerio


Alignment Length:141 Identity:34/141 - (24%)
Similarity:60/141 - (42%) Gaps:19/141 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 IPSEIDTTPFVRIGDNYYYIEPMNK-----VNWFQAAGACRMMNAHLASIEDKPEMEALIKYMKA 98
            |...::...|.::|..||..:.:.:     :.:..:.|...::...|       |..||:|...:
Zfish   121 IEKVVNFKTFKKVGQKYYVTDDVEETFDKGMQYCSSNGGALVLPRTL-------EENALLKVFVS 178

  Fly    99 KGFKNNDYFWISGNDLGTEGAFYWMSNGRPMTYAPWNGPKQMPDNYGGNENCVHMFATREMINDA 163
            ..||.   .:|...|...||.|. .::.:.:|:..| ||.| ||||.|.::| ...|...:.:|.
Zfish   179 SAFKR---LFIRITDREKEGEFV-DTDRKKLTFTNW-GPNQ-PDNYKGAQDC-GAIADSGLWDDV 236

  Fly   164 NCKIQMLYVCE 174
            :|......:||
Zfish   237 SCDSLYPIICE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12111NP_001259341.1 CLECT 55..174 CDD:153057 29/123 (24%)
mbl2NP_571645.2 CLECT_collectin_like 135..248 CDD:153061 31/127 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.