DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32281 and trmt12

DIOPT Version :9

Sequence 1:NP_728821.2 Gene:CG32281 / 317953 FlyBaseID:FBgn0052281 Length:457 Species:Drosophila melanogaster
Sequence 2:NP_001070632.1 Gene:trmt12 / 564925 ZFINID:ZDB-GENE-060825-182 Length:408 Species:Danio rerio


Alignment Length:324 Identity:78/324 - (24%)
Similarity:126/324 - (38%) Gaps:80/324 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QELQREQFRKIVQVPRLRVPESQVQRVMPLVKKFLLKMEHLHPVRAVDQSREILLHPTPVKNWDS 103
            :.:..:.|.:||.:        |.|    |.||..:|..|:   :.|:.:|..||  :..|.|  
Zfish    60 EHVAHDSFCEIVDI--------QAQ----LSKKSKVKSVHM---KLVEAARSFLL--SKGKEW-- 105

  Fly   104 LPTEDLQRQKVNAENFSFADLELRYENWSANEILKSVLPTEEEGLTSYSRIGHIAHLNLRDHLLP 168
              :|||.|. :........||.|..|...:|.:.|.:      |...::.:.          |..
Zfish   106 --SEDLGRD-IPGRWQCHGDLVLFTEGCFSNAVWKEI------GSEFWTAVA----------LTL 151

  Fly   169 YKQLIGQVLRDKLPNCRTVVNKASSIDNTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWN 233
            ..:.|.|:             |..|.|. ||...:.::.||..: |...:|.:.:|||.:|..::
Zfish   152 GVKRIAQI-------------KKISQDG-YRTPIVTMLLGDSSH-VTHIDNHIRYEFDVTKCMFS 201

  Fly   234 PRLSTEHERIVKMLKSDDVLYDVFAGVGPFSIP--AAKKRCHVLANDLNPESFRWLQHNAKRNKC 296
            ....||..||.....|.:.:.|::||:|.|::|  ......||.|.:.||::...||.|.:.|..
Zfish   202 SGNITEKLRIASFDCSGETVVDLYAGIGYFTLPYLVHANAAHVHACEWNPDAVAALQRNLEINGV 266

  Fly   297 LPNIKMSNKDGRQFIVEELRE------------------DLLKRLCTTDTTTYGI-HITMNLPA 341
            .....:...|.||..:.:|.:                  .||||      :|.|| ||..|:.|
Zfish   267 SNRCTVHQGDNRQLSLSDLADRVNLGLIPSSEEGWPVACRLLKR------STGGIMHIHQNVTA 324

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG32281NP_728821.2 Met_10 149..353 CDD:280612 51/214 (24%)
AdoMet_MTases 224..>313 CDD:302624 27/90 (30%)
trmt12NP_001070632.1 Trm5 2..407 CDD:225318 78/324 (24%)
AdoMet_MTases 220..>268 CDD:302624 15/47 (32%)