DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and TRF5

DIOPT Version :10

Sequence 1:NP_572490.2 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_014100.2 Gene:TRF5 / 855417 SGDID:S000005243 Length:642 Species:Saccharomyces cerevisiae


Alignment Length:315 Identity:118/315 - (37%)
Similarity:176/315 - (55%) Gaps:12/315 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 LHEEIEHFYQYVLPTPCEHAIRNEVVKRIEAVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLG 335
            |..||:.|..|:.|:..|...||..:.::...|..:|..|.:.:||||.|.|:||.||||.||..
Yeast   176 LTSEIKDFVHYISPSKNEIKCRNRTIDKLRRAVKELWSDADLHVFGSFATDLYLPGSDIDCVVNS 240

  Fly   336 LWEKLPLRTLEFELV----SRGIAEACTVRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAE 396
            .......|...:||.    ::|:  |..:.|:.|..|||||..:.::|:.:|:||...:|:::|:
Yeast   241 RNRDKEDRNYIYELARHLKNKGL--AIRMEVIVKTRVPIIKFIEPQSQLHIDVSFERTNGLEAAK 303

  Fly   397 LIKKFKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSYSLILMCISFLQMHPRGIYHD---TAN 458
            ||:::.||.|.|.:|||::||||..|.||.|.|||:..:::|.:..|||.||||...:|   ..|
Yeast   304 LIREWLRDSPGLRELVLIIKQFLHSRRLNNVHTGGLGGFTVICLVYSFLNMHPRIKSNDIDVLDN 368

  Fly   459 LGVLLLEFFELYGRRFNYMKIGISIKNG-GRYMPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGR 522
            |||||::||||||:.|.|..:.|||.:| ..|:|| ...|.:........|.|:||..|.|:|.|
Yeast   369 LGVLLIDFFELYGKNFGYDDVAISISDGYASYIPK-SCWRTLEPSRSKFSLAIQDPGDPNNNISR 432

  Fly   523 SSYGVFQVQQAFKCAYRVLALAVSPLNLLGIDPRV-NSILGRIIHITDDVIDYRE 576
            .|:.:..:::||..|:.:|......||......|| .||||.:|.......|:.:
Yeast   433 GSFNMKDIKKAFAGAFELLVNKCWELNSATFKDRVGKSILGNVIKYRGQKRDFND 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_572490.2 TRF4 271..>583 CDD:227585 118/315 (37%)
TRF5NP_014100.2 TRF4 100..611 CDD:227585 118/315 (37%)

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