DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and AT3G61690

DIOPT Version :10

Sequence 1:NP_572490.2 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_191728.2 Gene:AT3G61690 / 825342 AraportID:AT3G61690 Length:1303 Species:Arabidopsis thaliana


Alignment Length:892 Identity:174/892 - (19%)
Similarity:281/892 - (31%) Gaps:292/892 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 VLPTPCEHAIRNEVVKRIEAVVHSIWPQAVVEIFGSFRTGLFLPTSDIDLVVLGL-------WEK 339
            :.|.|.....||.|...:..::...:||..:.:|||.....:||..||||.....       |..
plant    53 IQPNPPSEDRRNAVASYVRRLIMECFPQVQIFMFGSVPLKTYLPDGDIDLTAFSANQNLKDSWAN 117

  Fly   340 LPLRTLEFELVSRGIAEACTVRV-LDKASVPIIK-LTDRETQVKVDISFNMQSGVQS---AELIK 399
            |....||.|..:.. ||.....| ..:|.|.||| |.:   .:.||||||...|:.:   .|.:.
plant   118 LVRDMLEKEEKNEN-AEFHVKEVQYIQAEVKIIKCLVE---NIVVDISFNQIGGLCTLCFLEEVD 178

  Fly   400 KFKRDYPVLEKLVLVLKQFLLLRD-LNEVFTGGISSYSLILMCISFLQMHPRGIYHDTANLGVL- 462
            .:.....:.::.::::|.:..... :.....|.||:|:|..:.:....:.....   :..|.|| 
plant   179 HYINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFYLFNNSF---SGPLEVLY 240

  Fly   463 -LLEFFELYGRRFNYMKIGISIKNGGRYMPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYG 526
             .||||.    :|::....:|:...   :|...|         |.:..  :|  |..|:|.    
plant   241 RFLEFFS----KFDWQNFCLSLWGP---VPVSSL---------PDVTA--EP--PRRDVGE---- 281

  Fly   527 VFQVQQAF-KCAYRVLALAVSPLNLLG----------IDP-RVNSILGRIIHITDDVIDYREWIR 579
             .:|.:|| :...||.|:.::|..:.|          ||| |.|:.|||.:.            :
plant   282 -LRVSEAFYRACSRVYAVNIAPQEIQGQPFVSKHFNVIDPLRENNNLGRSVS------------K 333

  Fly   580 ENFEHLVVVDRISPLPTAAPTAYATANGAPKYVIM---PSGAVVQQLYHHPVQVPTAHGHSHAHS 641
            .||..:               ..|...||.|...:   |...::.::....:.....||......
plant   334 GNFFRI---------------RSAFTLGAKKLTRLLECPKENLIHEVNQFFMNTWERHGSGRRPD 383

  Fly   642 HSHGHAHPGAHLC-------QPYVTGTTVS-AVTTTTTMAVVTVGVSAGG--------------- 683
                  .||..|.       :||.....|| ::........:.:|...|.               
plant   384 ------APGNDLWLSRLGDPEPYHQAENVSNSLNNKRNQNAIRLGGVHGARSMPSQQNNCGTEIT 442

  Fly   684 --VQQQQQQQNATAHTHSQQQTQNQS--------------------------------------- 707
              |..|.|:....::..:|:...|||                                       
plant   443 SRVTYQTQKSRGNSYQPAQEVNSNQSALNDKLQQTVKPETLVNNFHGRHIFARTRSSPELTETHG 507

  Fly   708 ----QSRHRRGSTSSGDDSEDSKDGDVVETTSSAQEVVDIAL---------------STPNGLAN 753
                |||..|.:..:|....:|...|.:...|...|.:...:               .:|:..|:
plant   508 EALLQSRRSRAAPDAGKRQTNSTRVDSIRKKSLESETLSSGVRYSADSSSVRHTPSPQSPDSTAD 572

  Fly   754 MSMPMPVHAVGMPASNSWSGNGNGNGNSSSSTGSSPEIAHIAAQEMDPELEDQQQQQQ--HQETS 816
            ||          .|.||:                ..|:..::..| |..:..:|::|.  :..||
plant   573 MS----------SAVNSY----------------YDEVGSVSVNE-DFSVAGEQEEQDLVNSMTS 610

  Fly   817 ----GGNG-FIRPGDVGTG-----------SNRGGGDGSGGRNYNQRN----------------- 848
                |.|| |..|.:..||           ::.|         |.|||                 
plant   611 VTGQGFNGHFPFPFNFSTGHLPFPITPSILASMG---------YGQRNMPGIVPSNLPFIEAPWS 666

  Fly   849 -------NHNSSGYYHQQYYVPP---PMQQQLSKSNS------------SSN--YHQQHHHSHSH 889
                   |..||.:.|   |.|.   |:.::.||:.|            |.|  :|:....:||.
plant   667 TNLQFPQNFVSSPFTH---YFPSGAHPISEKPSKTGSDDMGSSEVNVDESDNDLWHEPERGTHSF 728

  Fly   890 GNHSHRQQHHHQQQHHHQQRPQHLRVGGGNRYQKSLGGSPIISAGNASNSSSNCSNSSSSSGSNN 954
            |..:.....|.....|.....:|..|....:.:.:.|       .:..||.|....||.......
plant   729 GLENGGYGMHQADDKHQSSFAEHSFVPSRRKNRLTRG-------DDLENSHSPVRGSSQIQSEER 786

  Fly   955 SRLPPLRGTLVNSSSAISIISISSESSIASSSSSSSRSGQDQQRDER 1001
            :         |.|.|.....|:.|.:|..||...|:..|....:|.|
plant   787 T---------VGSRSVSGASSVRSRTSSESSWDGSTTRGSKPAKDRR 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_572490.2 TRF4 271..>583 CDD:227585 77/327 (24%)
AT3G61690NP_191728.2 NT_PAP_TUTase 62..170 CDD:143392 35/111 (32%)

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