DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and AT2G40520

DIOPT Version :10

Sequence 1:NP_572490.2 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_850331.1 Gene:AT2G40520 / 818647 AraportID:AT2G40520 Length:502 Species:Arabidopsis thaliana


Alignment Length:276 Identity:64/276 - (23%)
Similarity:121/276 - (43%) Gaps:60/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 RNEVVKRIEAVVHSIWPQAVVEI--FGSFRTGLFLPTSDIDLVVL--GLWEKLPLR----TLEFE 348
            ||:::..::.:   :|.:..:|:  |||.....:||..||||.||  ...|:...|    .||.|
plant    57 RNKIISNLQTL---LWERLGIEVYLFGSMPLKTYLPDGDIDLTVLTHHASEEDCARAVCCVLEAE 118

  Fly   349 LVSRGIAEACTVRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQS----AELIKKFKRDYPVLE 409
            :.:..: :...|:.: :|.|.:||.:.|:  |..|||||..:|:.:    .::.|.|.||: :.:
plant   119 MGNSDL-QVTGVQYV-QAKVKVIKCSIRD--VAFDISFNQLAGLGALCFLEQVDKAFGRDH-LFK 178

  Fly   410 KLVLVLKQFLLLRD-LNEVFTGGISSYSLILMCISFLQMHPRGIYHDTANLGVLLLEFFELYGRR 473
            |.::::|.:..... :....:|.||:|:|.::.::.:.|.    |...:....:|.:|...|| .
plant   179 KSIILVKAWCFYESRILGANSGLISTYALAILVLNIVNMS----YSSLSGPLAVLYKFINYYG-S 238

  Fly   474 FNYMKIGISIKNGGRYMPKDELQRDMVDGHRPSLL-------CIE-------------------- 511
            |::....:::...   :|...|......|:....|       |:|                    
plant   239 FDWKNYCVTVTGP---VPISSLPDITETGNHEVFLDEKFFRECMELYSGETGVVEASRKYFPVKY 300

  Fly   512 ----DPLTPGNDIGRS 523
                |||...|::|||
plant   301 YNILDPLKHSNNLGRS 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_572490.2 TRF4 271..>583 CDD:227585 64/276 (23%)
AT2G40520NP_850331.1 NT_PAP_TUTase 57..158 CDD:143392 32/107 (30%)

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