DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and Mtpap

DIOPT Version :9

Sequence 1:NP_001259340.1 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_080433.1 Gene:Mtpap / 67440 MGIID:1914690 Length:585 Species:Mus musculus


Alignment Length:395 Identity:77/395 - (19%)
Similarity:142/395 - (35%) Gaps:98/395 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 SMSDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAHYYMNNHMEMIAKYKGEPWRKPDY- 262
            |:.:.::.|.|||.. |....|.:.| .|.|.|.::..|..:....:       :..|..|..: 
Mouse   126 SLQNGTHTPTQSTEA-AIPFKSRFLN-LRLKNPSSQVSGQPFVQTTN-------QSPPSSKKLFE 181

  Fly   263 --PYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIEAVVHSIWPQAVVEIFGSFRTGLFLP 325
              .|.|.:   .|::....:....|.....:|:.....||.:..:.:|..|:..|||........
Mouse   182 LLSYAESI---EEQLNTLLKAFQLTEENIRLRHLTCSLIEDIAAAYFPSCVIRPFGSSVNTFGKL 243

  Fly   326 TSDIDLVVLGLWE--KLPLRT------LEFELVSRGIAEACTVRVLD------------------ 364
            ..|:|: .|.|.|  ||.:..      :||::.:.......|.::|.                  
Mouse   244 GCDLDM-FLDLDETGKLDVHKNTGNFFMEFQVKNVPSERIATQKILSVIGECLDNFGPGCVGVQK 307

  Fly   365 --KASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFLLLRDLNEV 427
              .|..|:::.:.:.:..:.|::.|....::|:||:..:......:..||..::.:.....|...
Mouse   308 ILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFSVRCWARAHSLTSS 372

  Fly   428 FTGG-ISSYSLILMCISFLQ--------------------------------------MHPRGIY 453
            ..|. |:::||.:|.|.|||                                      :.|.|  
Mouse   373 IPGAWITNFSLTVMVIFFLQRRSPPILPTLDSLKSIADAEDRCILEGNNCTFVQDVNKIQPSG-- 435

  Fly   454 HDTANLGVLLLEFFELYGRRFNYMKIGISIKNGGRYMPKDELQRDMVDGHRPSLLCIEDPLTPGN 518
             :|..|.:|:.||||.:| .|.:.|..|:|:.|......|.           |.|.|::|.....
Mouse   436 -NTETLELLIKEFFEYFG-NFAFNKNSINIRQGREQNKPDS-----------SPLYIQNPFETSL 487

  Fly   519 DIGRS 523
            :|.::
Mouse   488 NISKN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_001259340.1 NT_PAP_TUTase 291..401 CDD:143392 26/137 (19%)
PAP_assoc 458..518 CDD:281779 17/59 (29%)
MtpapNP_080433.1 NT_PAP_TUTase 209..347 CDD:143392 26/138 (19%)
PAP_assoc 441..486 CDD:281779 16/56 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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