DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and tent4a

DIOPT Version :10

Sequence 1:NP_572490.2 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_073787879.1 Gene:tent4a / 557829 ZFINID:ZDB-GENE-041021-1 Length:763 Species:Danio rerio


Alignment Length:889 Identity:311/889 - (34%)
Similarity:414/889 - (46%) Gaps:204/889 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQATTINGSTSSSSSSSNSG---NNN 62
            |||.|.|.|.||:||:...|:::|||                        |..:.:|:|   |::
Zfish     1 MDPRVAWIQPEQKGPANALWMRVWET------------------------SQVNRTNTGQHQNHH 41

  Fly    63 NNNNNNIINN-------TITNTTNNT---GNNSSAKPYLSRPYSSLNRVLNFRADSLEILQQQQQ 117
            ::::|..:|:       |:.:..||:   .||.:|.|      .|.:.||               
Zfish    42 HHHHNFCVNSPAFDVYKTVASNANNSTNIKNNGTAIP------GSGSAVL--------------- 85

  Fly   118 QQQLNGTTQRNSTNINTTSGGSTSSSADSTTNRDNNSPANSSSTNGPGAGTGTSTGAGGTGTNSP 182
              .|||.......:..|  |||...||.|.|.....||               :..||......|
Zfish    86 --ALNGNAVDGEMSQKT--GGSVVDSASSCTRIRTTSP---------------NVIAGNMNKGQP 131

  Fly   183 ATTASSTAATTTGPATSMSDTSNNPPQ------------------STTTPASRTNSIYYNPSRKK 229
            ..|.:.:.....       :..::||.                  |..|.....:..:::|.|:|
Zfish   132 FFTLNESVLNNV-------NHHHHPPHPHLRHFHQEQQSCMKRHPSYPTAIHNHHHHHHHPGRRK 189

  Fly   230 RPENKAG--GAHYYMNNHMEMIAKYKGEPW--RKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHA 290
             .:|||.  |.:|.::|......:..|.||  ||    |..||.||||||..||.::.|.|.|..
Zfish   190 -SDNKASTYGINYLLSNWTNGNYESSGTPWKTRK----YSPGVDGLHEEIMDFYNFMSPRPEEAT 249

  Fly   291 IRNEVVKRIEAVVHSIWPQAVVEIFGSFRTGLFLPT-SDIDLVVLGLWEKLPLRTLEFELVSRGI 354
            :|.|||.|||:|:..:||.|.|:|||||.||||||| |||||||.|.|||.||:.||..|....:
Zfish   250 MRQEVVDRIESVIKELWPTADVQIFGSFSTGLFLPTSSDIDLVVFGKWEKPPLQQLEQALRKHSV 314

  Fly   355 AEACTVRVLDKASVPIIKLTDRETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFL 419
            ||..:::|||||:||||||||:||:||||||||:::|:::|..||::.:.|.||..|:.||||||
Zfish   315 AEPYSIKVLDKATVPIIKLTDQETEVKVDISFNVETGIKAASFIKEYVKKYTVLPYLIFVLKQFL 379

  Fly   420 LLRDLNEVFTGGISSYSLILMCISFLQMHPR-GIYHDTANLGVLLLEFFELYGRRFNYMKIGISI 483
            |.|||||||||||||||||||.|||||:||| ...:...|||:||:||||||||.|||:|.||.|
Zfish   380 LQRDLNEVFTGGISSYSLILMVISFLQLHPRIDTRNPNMNLGILLIEFFELYGRHFNYLKTGIRI 444

  Fly   484 KNGGRYMPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRVLALAVSPL 548
            ||||.||.|:::.:.|.:|:|||:|||||||.||||:||||||..||::||..||.:|:.|||||
Zfish   445 KNGGAYMAKEDIMKAMSNGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKEAFDYAYIILSHAVSPL 509

  Fly   549 NLLGIDPRVNSILGRIIHITDDVIDYREWIRENFEHLVVVDRISPLPTAAPTAYATANGAPKYVI 613
            .....:...:|.|||||.:|.:||||||||                                  |
Zfish   510 ARSYPNKDSDSTLGRIIKVTQEVIDYREWI----------------------------------I 540

  Fly   614 MPSGAVVQQLYHHPVQVPTAHGHSHAHSHSHGHAHPGAHLCQPYVTGTTVSAVTTTTTMAVVTVG 678
            ...|.      .|..::....|.||...                     |..|.|.:.:.|    
Zfish   541 KKWGG------RHNSRIERNPGSSHKEH---------------------VDQVETGSLLGV---- 574

  Fly   679 VSAGGVQQQQQQQNATAHTHSQQQTQNQSQSRHRRGSTSSGDDSEDSKDGDVVETTSSAQEVVDI 743
                ||::|||:.:.:.|:.....:.:..|......|.||...|:...|    .|...|..|...
Zfish   575 ----GVEEQQQRDSVSPHSADSPMSLSSPQQHSSASSASSLSGSDIDSD----STPYVAPPVAPF 631

  Fly   744 ALS--TPNGL---ANMSMPMPVHAVGMPASNSWSGNGNGN-------GNSSSSTGSSPEIAHIAA 796
            .|.  .|..|   ..|.......|:|||.......:..||       |.........|...|:..
Zfish   632 PLQILAPGPLPPALQMGKASIAAALGMPPVTQARVSIPGNLSLHTLPGRQVCMADGPPSYLHMPP 696

  Fly   797 QEMDPELEDQQQQQQHQETSGG----NGFIRPGDVGTG--SNRG 834
            ..:.|..........|...:|.    .||..|..|.:.  ||||
Zfish   697 PAVPPAPPSPLPSPLHHPKAGPKFPLKGFHNPAVVHSPVLSNRG 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_572490.2 TRF4 271..>583 CDD:227585 193/313 (62%)
tent4aXP_073787879.1 None

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