DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trf4-1 and Tailor

DIOPT Version :9

Sequence 1:NP_001259340.1 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001262327.1 Gene:Tailor / 40847 FlyBaseID:FBgn0037470 Length:563 Species:Drosophila melanogaster


Alignment Length:569 Identity:103/569 - (18%)
Similarity:198/569 - (34%) Gaps:176/569 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TTINGSTSSSSSSSNSGNNNNNN-------NNNIINNTIT----------NTTNNTGNNSSAKPY 90
            |::.|||:.:.::..:.....|.       |..:..|.:|          |:.|.|.|.....|:
  Fly    32 TSLPGSTAPNIAAPVTKATKKNKTMAEMMPNKLLYMNPLTMEAHFFLQTLNSVNQTTNPPQLDPH 96

  Fly    91 LSRPYSSLNRVLNFRADSLE-----ILQQQQ----------QQQQLNGTTQRNSTNINTTSGGST 140
            |:   :.|.|::......|:     :|.|:.          |.|:|. |.:|             
  Fly    97 LA---NLLERIMVGIESYLDRNPTYVLPQEMAAPGEGVAFVQPQELQ-TIKR------------- 144

  Fly   141 SSSADSTTNRDNNSPANSSSTNGPGAGTGTSTGAGGTGTNSPATTASSTAATTTGPATSMSDTSN 205
            :.|..|.:||                                      ...||...|.:.....:
  Fly   145 TFSCSSCSNR--------------------------------------IVGTTIAKAVAHLSEQH 171

  Fly   206 NPPQSTTTPASRTNSIYYNPSRKKRPENKAGGAHYYMNNHMEMIAKYKGEPWRKPDYPYGEGVIG 270
            ..|.....|      :..:|:.:.:.|.|.  |......|:.:....|....          ::|
  Fly   172 PKPNPNNQP------VQPHPTHQTKQEKKQ--AQVKARQHITVRLPKKARAM----------IVG 218

  Fly   271 LHEEIEHFYQYVLPTPCEHAIRNEVVKRIEAVVHSI-------WPQAVVEI--FGSFRTGLFLPT 326
               ||.:.::...|.    |.:.:|:...:.:...:       :|:..:.:  |||..||:...:
  Fly   219 ---EITNVFKDKYPI----ADKLKVIPEYDVIEQDLCKLLSPGFPKQPLRVYKFGSRITGIGNRS 276

  Fly   327 SDIDLVV-LGLWEKLPLRTLEFELVSRGIAEACTVR-------------VLDKASVPIIKLTDRE 377
            ||:||.| :|. ......|.|....:..:|:...:|             .:::|.|||||.....
  Fly   277 SDLDLFVDIGK-SGNTFHTFEHRASNATVAKLRAMRKFFCDSEDWRLINFIEQARVPIIKTCHLP 340

  Fly   378 TQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSYSLILMCI 442
            |.::.||..| ..|..:..|:|......|:.:.:.:.:|.:|....|.|    .||:||:.||.|
  Fly   341 TGIECDICLN-SMGFCNTNLLKYIFESQPLTQYMCIYVKNWLERCKLTE----QISTYSITLMVI 400

  Fly   443 SFLQMH----PRGI--YHDTANLGVLLLEFFELYGRRFNYMKIGIS------------IKNGGRY 489
            .|||:.    |..:  ..|.||..||:..:...:.:: ::.::|:.            ::|...|
  Fly   401 YFLQLQALLPPIAMLQIEDAANQAVLVGPWVVNFAQK-SFSELGLQQLKATVPVIKGFLRNFFAY 464

  Fly   490 MPKDELQRDMVDGHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAY 538
            ..|.:.:..:|..:                ||:::..:.::::.....|
  Fly   465 FAKFDYEHFLVCPY----------------IGQANVEIAKIERMLHARY 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_001259340.1 NT_PAP_TUTase 291..401 CDD:143392 30/132 (23%)
PAP_assoc 458..518 CDD:281779 8/71 (11%)
TailorNP_001262327.1 DUF1439 <70..126 CDD:297551 12/58 (21%)
NT_PAP_TUTase 245..364 CDD:143392 29/120 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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