DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and Tent4b

DIOPT Version :10

Sequence 1:NP_572490.2 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001359262.1 Gene:Tent4b / 214627 MGIID:1917820 Length:700 Species:Mus musculus


Alignment Length:957 Identity:311/957 - (32%)
Similarity:420/957 - (43%) Gaps:310/957 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPFVGWFQKEQEGPSLCTWLKIWETNAQEMGALLNQQLQQATTINGSTSSSSSSSNSGNNNNNN 65
            |||.:.|||.||.|||...|::||||.........|....       |:.:||:|..||      
Mouse     1 MDPRIAWFQPEQLGPSNSLWMQIWETTQGLRNLYFNHHCH-------SSGASSASGGSG------ 52

  Fly    66 NNNIINNTITNTTNNTGNNSSAKPYLSRPYSSLNRVLNFRADSLEILQQQQQQQQLNGTTQRNST 130
                         :..|:.....|..:..:.|..|.|...|...|               ||:..
Mouse    53 -------------SGPGSPGGTAPAPAGMFRSGERPLGGLAVPAE---------------QRDFL 89

  Fly   131 NINTTSGGSTSSSADSTTNRDNNSPA--NSSSTNGPGAGTGTSTGAGGTGTNSPATTASSTAATT 193
            .:.||:           .|.:::.||  ...::.||.|              ||..:|.|:..  
Mouse    90 PLETTN-----------NNNNHHQPAAWARRASAGPSA--------------SPVPSAPSSPR-- 127

  Fly   194 TGPATSMSDTSNNPPQSTTTPASRTNSIYYNPSRKKRPENKAG--GAHYYMNNHMEMIAK----- 251
              ||.::      |...:|.|||       ..|.|::.:|||.  |.:|.:.......|.     
Mouse   128 --PAAAL------PASESTDPAS-------GSSNKRKRDNKASTYGLNYSLLQPSGGRAAGGGRA 177

  Fly   252 ------YKGEPWRKPDYPYGEGVIGLHEEIEHFYQYVLPTPCEHAIRNEVVKRIEAVVHSIWPQA 310
                  |.|.||::.:  |.:||:||||||..||:|:.|.|.|..:|.|||.|||:|:..:||.|
Mouse   178 DGGGGVYSGTPWKRRN--YNQGVVGLHEEISDFYEYMSPRPEEEKMRMEVVSRIESVIKELWPSA 240

  Fly   311 VVEIFGSFRTGLFLPTSDIDLVVLGLWEKLPLRTLEFELVSRGIAEACTVRVLDKASVPIIKLTD 375
            .|:|||||:|||:||||||||||.|.||.|||.|||..|....:|:..:|:|||||:||||||||
Mouse   241 DVQIFGSFKTGLYLPTSDIDLVVFGKWENLPLWTLEEALRKHKVADEDSVKVLDKATVPIIKLTD 305

  Fly   376 RETQVKVDISFNMQSGVQSAELIKKFKRDYPVLEKLVLVLKQFLLLRDLNEVFTGGISSYSLILM 440
            ..|:||||||||:|:||::|:|||.|.:.||||..||||||||||.|||||||||||.||||.||
Mouse   306 SFTEVKVDISFNVQNGVRAADLIKDFTKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLM 370

  Fly   441 CISFLQMHPRGIYHD----TANLGVLLLEFFELYGRRFNYMKIGISIKNGGRYMPKDELQRDMVD 501
            .:||||:|||   .|    ..|.||||:||||||||.|||:|.||.||:||.|:.|||:|::|:|
Mouse   371 AVSFLQLHPR---EDACIPNTNYGVLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKNMLD 432

  Fly   502 GHRPSLLCIEDPLTPGNDIGRSSYGVFQVQQAFKCAYRVLALAVSPLNLLGIDPRVNSILGRIIH 566
            |:|||:|.|||||.||||:||||||..||:|||..||.||:.||||:.....:....|||||||.
Mouse   433 GYRPSMLYIEDPLQPGNDVGRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIR 497

  Fly   567 ITDDVIDYREWIRENFEHLVVVDRISPLPTAAPTAYATANGAPKYVIMPSGAVVQQLYHHPVQVP 631
            :||:|..||:||.:.:                                       .|.:.|    
Mouse   498 VTDEVATYRDWISKQW---------------------------------------GLQNRP---- 519

  Fly   632 TAHGHSHAHSHSHGHAHPGAHLCQPYVTGTTVSAVTTTTTMAVVTVGVSAGGVQQQQQQQNATAH 696
                                   :|...|..|:.:..|                ||..:.|    
Mouse   520 -----------------------EPSCNGNGVTLIVDT----------------QQLDKCN---- 541

  Fly   697 THSQQQTQNQSQSRHRRGSTSSGDDSEDSKDGDVVETTSSAQEVVDIALSTPNGLANMSMPMPVH 761
                   .|.|:.:...|...|                                  |.|.|:..|
Mouse   542 -------NNLSEEKEALGKCRS----------------------------------NASEPLSKH 565

  Fly   762 AVGMPASNSWSGNGNGNGNSSSSTGSS---------------------PEIAHIAAQEMDPELED 805
            :         |.:.:|..:|||:|.||                     |.:..:.:|::..|:..
Mouse   566 S---------SNSSSGPVSSSSATQSSSSDVDSDATPCKTPKQLLCRPPTVTRVGSQDVSLEVSQ 621

  Fly   806 QQQQQQHQETSGGNGFIRPGDVGTGSNRGGGDGSGGRNYNQRNNHNSSGYYHQQYYVPPPMQQQL 870
            ...:.|..:|:                            |..||.|.|.:...:.:         
Mouse   622 AVGKMQSTQTT----------------------------NTPNNANKSQHGSARLF--------- 649

  Fly   871 SKSNSSSNYHQQHHHSH-------SHGNHSHRQQHHHQQQHHHQQRP 910
              .:||..:......||       .|...|:.|.:|.:::.|.:..|
Mouse   650 --RSSSKGFQGTAQTSHGALMTSKQHQGKSNTQYYHGKKRRHKRDAP 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_572490.2 TRF4 271..>583 CDD:227585 199/315 (63%)
Tent4bNP_001359262.1 TRF4 201..>473 CDD:227585 180/274 (66%)

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