DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trf4-1 and C53A5.17

DIOPT Version :9

Sequence 1:NP_001259340.1 Gene:Trf4-1 / 31795 FlyBaseID:FBgn0030049 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001256592.1 Gene:C53A5.17 / 13216595 WormBaseID:WBGene00194707 Length:474 Species:Caenorhabditis elegans


Alignment Length:170 Identity:37/170 - (21%)
Similarity:67/170 - (39%) Gaps:47/170 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 LYGRRFNYMK-IGISIKNGGRYM--PKDELQRDMVDGHRPSLLCIE-------DPLTPGNDIGRS 523
            |.|.:...:| :..|.|:|.:|:  ..|::|.|........||..|       |..|...|:   
 Worm    60 LIGHKLKPLKNLVDSEKDGKKYLVFHPDKVQEDETRFKILELLKRELGNEKLLDWTTLSKDL--- 121

  Fly   524 SYGVFQVQQAFKCAYRVLALAVSPLNLLGIDPRVNSILGRIIH--ITDDVIDYREWIRENFEHLV 586
            ::..:..:..||        ||.|   :|||....:..|.|||  ..|:::.:|..|.|     |
 Worm   122 TFENWDAKSIFK--------AVLP---VGIDYSSYTQTGHIIHCNFADEILPFRFIIAE-----V 170

  Fly   587 VVDRISPLPTAAPTAYATANGAPKYVIMPSGAVVQQLYHH 626
            ::|:::...|                ::..|.::..:|.:
 Worm   171 LLDKVNNCKT----------------VVQKGNIITNVYRN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trf4-1NP_001259340.1 NT_PAP_TUTase 291..401 CDD:143392
PAP_assoc 458..518 CDD:281779 15/58 (26%)
C53A5.17NP_001256592.1 Met_10 144..363 CDD:280612 13/72 (18%)
AdoMet_MTases 268..>311 CDD:302624
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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