DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and cfd

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:259 Identity:77/259 - (29%)
Similarity:124/259 - (47%) Gaps:46/259 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 TSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPMLT---LVR 385
            |.:.:.||.||:..:.|::|::.:   |.::.    |||.||.|::|:::|||.....|   .|.
Zfish    17 TGDCITGGQEAKAHSRPYMASVQW---NGKHE----CGGFLISSQWVMSAAHCFQDGRTSGVKVV 74

  Fly   386 LGAHDLSQPAESGAMDLR---IRRTVVHEHFDLNSISNDIALIELNVVGALPGNISPICL----- 442
            ||||.|     |||.|.:   ......|..|.:::..||||||:|:........:.|:..     
Zfish    75 LGAHSL-----SGAEDTKQTFDAEVYNHPDFSISNYDNDIALIKLDKPVTQSDAVKPVKFQRDET 134

  Fly   443 --PEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIFQFVQFSDK 505
              |:.|..::         .||||::.:.|.....|.:..:|::.|..|.   ::.|...:|:..
Zfish   135 ADPKEAAVVE---------TAGWGSLNNMGGRPDKLHELSIPVMERWRCG---RADFYGEKFTSN 187

  Fly   506 VLCAGSSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVS-FGYECARPNFPGVYTRVASYVPWI 568
            :|||.....|.|.|||||||:        ||..::|:.| .|.:|.....||:||.::.|..||
Zfish   188 MLCAADKRKDTCDGDSGGPLL--------YRGIVVGITSNGGKKCGSSRKPGLYTIISHYASWI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 76/255 (30%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 76/255 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.