DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and ctrb.3

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001017724.1 Gene:ctrb.3 / 550419 ZFINID:ZDB-GENE-050417-229 Length:265 Species:Danio rerio


Alignment Length:267 Identity:85/267 - (31%)
Similarity:137/267 - (51%) Gaps:31/267 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 CG-------ISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAH 375
            ||       :||..  |:|.|.||...::||..:|..|     ....| ||||||:..:|:|:||
Zfish    19 CGVPAIPPVVSGYA--RIVNGEEAVPHSWPWQVSLQDF-----TGFHF-CGGSLINEFWVVTAAH 75

  Fly   376 CINPMLTLVRLGAHDLSQP-AESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNISP 439
            |.......|.||.|:..:. .:.....:::.:...|..::.|:|.|||||::|....:|..::||
Zfish    76 CSVRTSHRVILGEHNKGKSNTQEDIQTMKVSKVFTHPQYNSNTIENDIALVKLTAPASLNAHVSP 140

  Fly   440 ICLPEAAKFMQQDFV-GMNPFVAGWGAVKHQGV-TSQVLRDAQVPIVSRHSCEQSYKSIFQFVQF 502
            :||.||:    .:|. ||....:|||..::..: |...|:...:|::|...|:..:.|     ..
Zfish   141 VCLAEAS----DNFASGMTCVTSGWGVTRYNALFTPDELQQVALPLLSNEDCKNHWGS-----NI 196

  Fly   503 SDKVLCAGSSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVASYVPW 567
            .|.::|||::...:|.|||||||:..  :.|::.  |:|:||:|.....|..||||.||.....|
Zfish   197 RDTMICAGAAGASSCMGDSGGPLVCQ--KDNIWT--LVGIVSWGSSRCDPTMPGVYGRVTELRDW 257

  Fly   568 IKKHIAS 574
            :.:.:||
Zfish   258 VDQILAS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 78/245 (32%)
ctrb.3NP_001017724.1 Tryp_SPc 33..258 CDD:214473 78/243 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.