DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and CG11841

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster


Alignment Length:272 Identity:79/272 - (29%)
Similarity:125/272 - (45%) Gaps:54/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 VVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCI---NPMLTLVRLGA- 388
            :|.|..|....:|:.|.||:.:.||.  :|:.|||:||.:|.|:|:|||.   :..:.:||||. 
  Fly    72 IVDGTPAEPKEFPFAARLGHRKTNNE--IKWFCGGTLISNRLVLTAAHCFFSEHGEVNVVRLGEL 134

  Fly   389 -----HDLSQPAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNISPICLPEAAKF 448
                 .|.::|.:.|.:.|:     .|..|:...:.|||.:::|:..........|.|||.....
  Fly   135 EFDTDTDDAEPEDFGVLALK-----AHPGFENPQLYNDIGIVQLDREVKFNRYKHPACLPFDDGE 194

  Fly   449 MQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKS-IFQFVQFSDKV------ 506
            ..:.|:.:     |||..|.....|:.|...|:         |.||. ....|..:|::      
  Fly   195 QHESFIAI-----GWGQKKFAQKESKKLLKVQL---------QGYKDRCVSSVDANDELPNGYEP 245

  Fly   507 ---LCAGS-SSVDACQGDSGGPLMMPQLEGNVYR------FYLLGLVSFGYECARPNFPGVYTRV 561
               ||.|| .:.|.|.||||||::       .|.      ::::|:.|.|..|:.|:.|..||||
  Fly   246 KSQLCIGSRDNKDTCNGDSGGPVL-------AYHKDLACMYHVMGITSAGITCSTPDIPSAYTRV 303

  Fly   562 ASYVPWIKKHIA 573
            ..::.|||..:|
  Fly   304 HYFLNWIKGELA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 78/268 (29%)
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 76/266 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.