DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and LPA

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_005568.2 Gene:LPA / 4018 HGNCID:6667 Length:2040 Species:Homo sapiens


Alignment Length:532 Identity:137/532 - (25%)
Similarity:199/532 - (37%) Gaps:122/532 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 TPAVIP-----TFQPTPPNPQTPVTPPLITTSSSTTSSTTST--TGLTTTTTAGTT------LPL 125
            ||.|:|     ......|..||||.......:..:...|.||  ||.|..:.:..|      .|.
Human  1589 TPTVVPVPSMEAHSEAAPTEQTPVVRQCYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPE 1653

  Fly   126 PMPTCPSQPLVCLTGGARPLPNCPCIDPR---QQQNSPLLSST-GPQIGSDMMVFMPLNSGRRRR 186
            ..|........|....|...|.|..:||.   :..|....|.| |..:....::.:| :.|    
Human  1654 NYPNDGLTMNYCRNPDADTGPWCFTMDPSIRWEYCNLTRCSDTEGTVVAPPTVIQVP-SLG---- 1713

  Fly   187 RRRRPQSCQDA--------RSRPGSCLPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMVC 243
                |.|.||.        |.:..:.:..|.|    ||:..|....|:........:.|.....|
Human  1714 ----PPSEQDCMFGNGKGYRGKKATTVTGTPC----QEWAAQEPHRHSTFIPGTNKWAGLEKNYC 1770

  Fly   244 CATDRSGNARSRKDVFVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPP 308
            ...|...|.     .:..|..|...|.:..:               ||  ..|.||....|...|
Human  1771 RNPDGDING-----PWCYTMNPRKLFDYCDI---------------PL--CASSSFDCGKPQVEP 1813

  Fly   309 NNAPRESATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNAL-KFLCGGSLIHSRYVIT 372
            ...|             ..:|||..|...::||..:|       |... |..|||:||...:|:|
Human  1814 KKCP-------------GSIVGGCVAHPHSWPWQVSL-------RTRFGKHFCGGTLISPEWVLT 1858

  Fly   373 SAHCI----NPMLTLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGAL 433
            :|||:    .|....|.||||. ....||...::.:.|..      |.....||||::|:....:
Human  1859 AAHCLKKSSRPSSYKVILGAHQ-EVNLESHVQEIEVSRLF------LEPTQADIALLKLSRPAVI 1916

  Fly   434 PGNISPICLPEAAKFMQQDFV---GMNPFVAGWGAVKHQGV-TSQVLRDAQVPIVSRHSCEQSYK 494
            ...:.|.|||      ..|::   ....::.|||  :.||. .:.:|::||:.::....|.. ||
Human  1917 TDKVMPACLP------SPDYMVTARTECYITGWG--ETQGTFGTGLLKEAQLLVIENEVCNH-YK 1972

  Fly   495 SIFQFVQFSDKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGV 557
            .|           ||.  :...|:|||||||||:..:.:    ::.|.|:.|:|..|||||.|||
Human  1973 YI-----------CAEHLARGTDSCQGDSGGPLVCFEKD----KYILQGVTSWGLGCARPNKPGV 2022

  Fly   558 YTRVASYVPWIK 569
            |.||:.:|.||:
Human  2023 YARVSRFVTWIE 2034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440 10/57 (18%)
Tryp_SPc 328..571 CDD:238113 81/253 (32%)
LPANP_005568.2 Kringle 28..105 CDD:395005
Kringle 142..219 CDD:395005
Kringle 256..333 CDD:395005
Kringle 370..447 CDD:395005
Kringle 484..561 CDD:395005
Kringle 598..675 CDD:395005
Kringle 712..789 CDD:395005
Kringle 826..903 CDD:395005
KR 938..1019 CDD:214527
Kringle 1054..1131 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1166
KR 1166..1246 CDD:214527
KR 1272..1352 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1365..1388
KR 1386..1466 CDD:214527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1476..1497
KR 1500..1581 CDD:214527
KR 1614..1695 CDD:214527 16/80 (20%)
Kringle 1720..1799 CDD:395005 16/104 (15%)
Tryp_SPc 1820..2034 CDD:238113 80/251 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.