DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Np

DIOPT Version :9

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001246213.1 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster


Alignment Length:589 Identity:149/589 - (25%)
Similarity:230/589 - (39%) Gaps:133/589 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 PPPPFQPIGPLI----PPQPALP--STPAVIPTFQPTPPNPQTPVTPPLITTSSSTTSSTTSTTG 112
            |.||.....||:    |.....|  :|.....|...|.|.|.....||..||:::|.::||:|..
  Fly   510 PKPPASSTTPLVTKKKPTTTNAPTTTTTTTTTTTTTTTPKPTRRTKPPTTTTTTTTKATTTTTKA 574

  Fly   113 LTTTTTAGTTLPLPMPTCPSQPLVCLTG----------GARPLPNC---------------PCID 152
            .||||||...:....||  |.||...|.          .|.|..|.               |...
  Fly   575 TTTTTTAKPLITTEPPT--SAPLTTTTKKTGLITWTDVEAEPPTNASISNDWQPAPPSNWLPLTT 637

  Fly   153 PRQQQNSPLLSSTGPQIGSDMMVFMPLNS---------GRRRRRRRRPQSCQDAR---------- 198
            ...:......:||.|...:|.:|.....|         |:.::..:.|:....|:          
  Fly   638 ESSETADKTSASTAPPSATDKVVISVATSVSEVETHGPGKPQKTTKPPKPSSTAKPTTTTTAAAT 702

  Fly   199 ------SRPGSCLPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMVCCA--------TDRS 249
                  ..|.|.:.|.|           :...:|.||..:.....|:.....:        ||.|
  Fly   703 TIVKTTEAPASSIELAS-----------STSSYTDLGSDLAASSSSSTTTTTSSPTTAAETTDYS 756

  Fly   250 GNARSRKDVFVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNAPRE 314
            |...:...:..|              |.:|..|..........:|.....:|.|           
  Fly   757 GEEPNTTTIEAT--------------GSTTVAPANALEGVDYKEVCGRRMFPEP----------- 796

  Fly   315 SATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFL--CGGSLIHSRYVITSAHCI 377
                        |:|||..|..|.:||..:|..:..:.     :|  ||.:|::..:.||:|||:
  Fly   797 ------------RIVGGANAAFGRWPWQISLRQWRTST-----YLHKCGAALLNENWAITAAHCV 844

  Fly   378 N---PMLTLVRLGAHDLSQPAES-GAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNIS 438
            :   |...|:|||.:||::..|. |..:.|::....|..||..:...|:||:..........||.
  Fly   845 DNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNII 909

  Fly   439 PICLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIFQFVQFS 503
            |:|:|:    ..::|:|...||.|||.:...|....||::..||:::...||..|:|........
  Fly   910 PVCVPD----NDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGYIEHIP 970

  Fly   504 DKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVASYVP 566
            ...:|||  ....|:|:||||||::: |.|.: .||:|.|::|:|..||..|.||||||::.:..
  Fly   971 HIFICAGWKKGGYDSCEGDSGGPMVL-QRESD-KRFHLGGVISWGIGCAEANQPGVYTRISEFRD 1033

  Fly   567 WIKK 570
            ||.:
  Fly  1034 WINQ 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:288855 9/65 (14%)
Tryp_SPc 327..568 CDD:214473 83/248 (33%)
Tryp_SPc 328..571 CDD:238113 84/251 (33%)
NpNP_001246213.1 Tryp_SPc 797..1035 CDD:214473 83/248 (33%)
Tryp_SPc 798..1038 CDD:238113 84/251 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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