DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and tmprss4b

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_073805980.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:449 Species:Danio rerio


Alignment Length:265 Identity:89/265 - (33%)
Similarity:134/265 - (50%) Gaps:38/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 SATCGISGAT--SNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCI 377
            |.:|...|..  .:|:|||:|.....:||..:|.:   |:|:    :|||||:.:.::|::|||.
Zfish   204 SVSCSDCGEVVGEDRIVGGVETSIEHWPWQVSLQF---NHRH----MCGGSLLSTSWIISAAHCF 261

  Fly   378 NPMLTLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISN--DIALIELNVVGALPGNISPI 440
            ......:......|.|......:.:.:...|:|:  |.|.::|  |||:::|........:|.|:
Zfish   262 TGRTQELSRWTVVLGQTKVMDVVGVSVDMIVIHK--DYNRLTNDFDIAMLKLTWPVKTGESILPV 324

  Fly   441 CLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQS--YKSIFQFVQFS 503
            |||.....::...|     |.|||.:|..|....||:.|.||:|:|..|.:.  |.|     ..:
Zfish   325 CLPPHQLAIKDMLV-----VTGWGLLKEGGALPTVLQKASVPLVNRSECSKPTIYSS-----SIT 379

  Fly   504 DKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVY---RFYLLGLVSFGYECARPNFPGVYTRVAS 563
            .::||||  ..:||||||||||||        ||   |:.|:|:||:|..|||...||||..|..
Zfish   380 PRMLCAGFLQGNVDACQGDSGGPL--------VYLSSRWQLIGIVSWGVGCAREGKPGVYADVTQ 436

  Fly   564 YVPWI 568
            .:.||
Zfish   437 LLDWI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 85/250 (34%)
tmprss4bXP_073805980.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.