DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32260 and Tmprss3

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:269 Identity:90/269 - (33%)
Similarity:140/269 - (52%) Gaps:37/269 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 ATCGISGATSNRVVGGMEARKGAYPWIAAL---GYFEENNRNALKFLCGGSLIHSRYVITSAHCI 377
            :.||:....|.|:|||..:....:||..:|   ||          .|||||:|...:::|:|||:
  Rat   205 SACGMRTGYSPRIVGGNVSSLTQWPWQVSLQFQGY----------HLCGGSVITPLWIVTAAHCV 259

  Fly   378 ----NPMLTLVRLGAHDL-SQPAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNI 437
                :|....|::|...| ..|..|..    :.:.:.|..:....:.|||||::|:........|
  Rat   260 YDLYHPKSWTVQVGLVSLMDSPVPSHL----VEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETI 320

  Fly   438 SPICLPEAAKFMQQDFV-GMNPFVAGWGAVKH-QGVTSQVLRDAQVPIVSRHSCEQSYKSIFQFV 500
            .|||||.:    :::|. |...:.:||||.:. .|..|.||..|.||::|...|  :::.::..:
  Rat   321 QPICLPNS----EENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKIC--NHRDVYGGI 379

  Fly   501 QFSDKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVAS 563
             .|..:||||  ...||:|||||||||:..  |..:::  |:|..|||..||..|.||||||:.|
  Rat   380 -ISPSMLCAGYLKGGVDSCQGDSGGPLVCQ--ERRLWK--LVGATSFGIGCAEVNKPGVYTRITS 439

  Fly   564 YVPWIKKHI 572
            ::.||.:.:
  Rat   440 FLDWIHEQL 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 86/254 (34%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 2/5 (40%)
Tryp_SPc 216..444 CDD:214473 85/252 (34%)
Blue background indicates that the domain is not in the aligned region.

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