DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Cela3b

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:265 Identity:84/265 - (31%)
Similarity:129/265 - (48%) Gaps:36/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 SNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPMLTL-VRLGA 388
            |:|||.|.:|...::||..:|.|.::   .:....|||:||...:|:|:.|||:...|. |.|| 
  Rat    25 SSRVVNGEDAVPYSWPWQVSLQYEKD---GSFHHTCGGTLIAPDWVMTAGHCISTSRTYQVVLG- 85

  Fly   389 HDLSQPAESG--------AMDLRIRRTVVHEHFDLNSIS--NDIALIELNVVGALPGNISPICLP 443
             :..:..|.|        |.||     .||..::.|.:|  |||||::|:....|...:...|||
  Rat    86 -EFERGVEEGPEQVIPVNAGDL-----FVHPKWNSNCVSCGNDIALVKLSRSAQLGDTVQLACLP 144

  Fly   444 EAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIFQFVQFSDK--V 506
            .|.:.:..   |...:::|||.:...|.....|:.|.:|:|....|     |.:.:..||.|  :
  Rat   145 PAGEILPN---GAPCYISGWGRLSTNGPLPDKLQQALLPVVDYAHC-----SKWDWWGFSVKKTM 201

  Fly   507 LCAGSSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSF--GYECARPNFPGVYTRVASYVPWIK 569
            :|||......|.|||||||..|...|.   :.:.|:.||  ...|.....|.|:|||:::..||:
  Rat   202 VCAGGDIQSGCNGDSGGPLNCPAENGT---WQVHGVTSFVSSLGCNTLKKPTVFTRVSAFNEWIE 263

  Fly   570 KHIAS 574
            :.||:
  Rat   264 ETIAN 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 80/257 (31%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 80/257 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.