DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Sp212

DIOPT Version :9

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster


Alignment Length:536 Identity:147/536 - (27%)
Similarity:215/536 - (40%) Gaps:129/536 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LVCLTGGARPLPNCPCIDPRQQQNSPLLSSTGPQIGSDMMVFMP-LNSGRRRRRRRRPQSCQDAR 198
            |:.| .||:.:|...|.|..:..|.......|.       :.:| |..||.|...|..|..:...
  Fly    11 LIAL-AGAQLVPENSCPDYFRYVNDAFQGVQGE-------ITLPSLMRGRNRIDIRFSQRGEQDA 67

  Fly   199 SRPGSCLP---------LT---------------SCPQLMQ------------EYQGQANEFHTF 227
            |..||.:|         ||               ..|:|.:            ||:...:.|:.|
  Fly    68 SAVGSLIPYPDENAVRQLTGSAKFRIAVRPNSSNGLPKLTRLSYNEQILCSASEYRPPNSFFNRF 132

  Fly   228 ----LGQSICGFDGSTF-------------MVCCATDRSGN------------ARSRKDVFVTTA 263
                :..|:..|..|.|             .|...|...||            ..:|....||.|
  Fly   133 YELDISGSLASFPSSVFNPFTRDGLDVNVQTVFYPTSSRGNDIWRGFTQPWTTVSNRSPAVVTPA 197

  Fly   264 -APFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPP----------PPNNAPRE--- 314
             .|...|...|:    .:.|:.|.|..| :...||:..||||||          ||...|.:   
  Fly   198 PTPTEIFWNQPV----PSVPITFAPPVP-TITSSPAPAPPPPPPLPTPPAVVTVPPATPPPQRFD 257

  Fly   315 ------SATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITS 373
                  |..||..|:|:..:|.|.|..:|.|||::|: |.:|  ..||.|.|.||||.|..||::
  Fly   258 PRSQISSVVCGREGSTTPFIVRGNEFPRGQYPWLSAV-YHKE--VRALAFKCRGSLISSSIVISA 319

  Fly   374 AHCINPML---TLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISN-DIALIELNVVGALP 434
            |||::.|.   .:|.||.:||....|.||....:.|.:.|..::..|.|: |||||.:.......
  Fly   320 AHCVHRMTEDRVVVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTFN 384

  Fly   435 GNISPICL--PEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIF 497
            ..|:|||:  .||::     .|....|:||||..:....| |..|..:..|.|...|..:::.  
  Fly   385 DIIAPICMWTVEASR-----TVSTTGFIAGWGRDEDSSRT-QYPRVVEAEIASPTVCASTWRG-- 441

  Fly   498 QFVQFSDKVLCAGS-SSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYE-----CARPNFPG 556
              ...:::.||||: .....|.|||||.||:.|.:    |:.|.|:||.|..     |....:. 
  Fly   442 --TMVTERSLCAGNRDGSGPCVGDSGGGLMVKQGD----RWLLRGIVSAGERGPAGTCQLNQYV- 499

  Fly   557 VYTRVASYVPWIKKHI 572
            :|..::.::.||.::|
  Fly   500 LYCDLSKHINWISENI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:288855 17/102 (17%)
Tryp_SPc 327..568 CDD:214473 81/252 (32%)
Tryp_SPc 328..571 CDD:238113 83/254 (33%)
Sp212NP_996209.2 GD_N 23..122 CDD:292649 19/105 (18%)
Tryp_SPc 277..514 CDD:238113 83/254 (33%)
Tryp_SPc 277..511 CDD:214473 81/251 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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