DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32260 and svh-1

DIOPT Version :9

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:596 Identity:149/596 - (25%)
Similarity:213/596 - (35%) Gaps:198/596 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PIYALPPPQGPPYPAPPPPPPPFQPIGPLIPPQPALPSTPAVIPTFQPTPPNPQTPVTPPLITTS 100
            |||.:...|..            ..:|||.|            .|..||.|:..:|         
 Worm   482 PIYTVESHQSE------------SSLGPLQP------------TTLHPTNPSFDSP--------- 513

  Fly   101 SSTTSSTTSTTGLTTTTTAGTTLPLPMPTCPSQPLVCLTGGARPLPNCPCIDPRQQQNSPLLSST 165
                    |:......|:...||   .|..|:..|.||..     |||         .|.::|:.
 Worm   514 --------SSVSQMRRTSPSATL---APRLPAWNLSCLRE-----PNC---------TSTVISTC 553

  Fly   166 GPQIGSDMMVFMPLNSGRRRRRRRRPQSCQDARSRPGSCLPL-------TSCPQLMQEYQGQANE 223
            .|                     .|...||.|....|||:..       ..|.....|...:||.
 Worm   554 EP---------------------IRCSHCQQAACGDGSCIRFDQLCNGQIDCQSGEDEDYCRANS 597

  Fly   224 FHTFLGQSICGF----DGSTFMVCCATDRSGNARSRKDVFVTTAAPFGFFHF-----SPLSGG-- 277
            |....|....|:    ..|.:...||...:|...:.    :..|...|...|     :.:|.|  
 Worm   598 FRLTNGSDTSGYLEVLFRSRWEPICADHLNGKISNS----ICDAMRLGEHGFILSTNATISSGYN 658

  Fly   278 ------------STATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNAPRESATCGISGATSN---- 326
                        |:.|.  ......:||                |....::.||:.....|    
 Worm   659 VNCDVDCSIRRSSSCTR--HARISCISQ----------------NGMSSASQCGLRYVEVNARDA 705

  Fly   327 ------RVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPMLTL-- 383
                  |||||.|...||:||.|||     .|:......||.|::...::||:|||......:  
 Worm   706 AKSRIARVVGGFETVPGAFPWTAAL-----RNKATKAHHCGASILDKTHLITAAHCFEEDERVSS 765

  Fly   384 --VRLGAHDLSQPAESGAMDLRIRRTVVHEHF-----DLNSISNDIALIELNVVGALPG-----N 436
              |.:|..|.:| .:.......::|.    ||     |:  .|:|||::|:    ..||     .
 Worm   766 YEVVVGDWDNNQ-TDGNEQIFYLQRI----HFYPLYKDI--FSHDIAILEI----PYPGIEFNEY 819

  Fly   437 ISPICLPEAAKFMQQDFV---GMNPFVAGWGAVKHQGVT-SQVLRDAQVPIVSRHSC---EQSYK 494
            ..|||||      .:|||   |....|:|||::   |:. ::.|:.|.:||::|..|   .|.|.
 Worm   820 AQPICLP------SKDFVYTPGRQCVVSGWGSM---GLRYAERLQAALIPIINRFDCVNSSQIYS 875

  Fly   495 SIFQFVQFSDKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGV 557
            |:      |....|||  ...:|:||||||||....:.:|   .|.|.|::|:|..||:...||:
 Worm   876 SM------SRSAFCAGYLEGGIDSCQGDSGGPFACRREDG---AFVLAGVISWGDGCAQKKQPGI 931

  Fly   558 YTRVASYVPWI 568
            ||.||.|:.||
 Worm   932 YTMVAPYLSWI 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:288855 14/60 (23%)
Tryp_SPc 327..568 CDD:214473 88/263 (33%)
Tryp_SPc 328..571 CDD:238113 89/264 (34%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566 7/31 (23%)
SRCR_2 599..681 CDD:382996 13/87 (15%)
Tryp_SPc 713..945 CDD:238113 89/264 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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