Protein Alignment CG32246 and Ndc1

DIOPT Version :9

• Sequence 1: NP_729020.2
• Gene: CG32246 / 317936
• FlyBaseID: FBgn0052246
• Length: 565
• Species: Drosophila melanogaster
• Sequence 2: XP_038966223.1
• Gene: Ndc1 / 362557
• RGDID: 1560173
• Length: 745
• Species: Rattus norvegicus
• Alignment Length: 662
• Identity: 123/662 - (18%)
• Similarity: 212/662 - (32%)
• Gaps: 232/662 - (35%)

  Fly    40 LTIFVAINLFEVMRPLVSVTEILRW---TLFSVYSS-VLMLLIRVSTMGFGLVLCHIHYNNPRCF 100
            :|.|:..:..::..|       ::|   :|...||| |:..|:.::.:   :::..|       |
  Rat   144 ITAFIVFSSIDLFHP-------IQWLSDSLNEFYSSQVIFYLLLLAVV---IIIISI-------F 191

  Fly   101 KNNILRITYEFP-IRLGLIASILS------------ITMTTSWLYA--------SFVDLNNGNYL 144
            ......:....| .||.|||.||.            :.|..:|..|        |.|....|...
  Rat   192 NVEFYTVVPSIPGSRLALIARILHPQQLTHSFIHAVMGMAVAWCAAIMTKGQSRSLVVPCTGTES 256

  Fly   145 LGG-------SWYYL--MTFGCFCGISY---YHKSQGRCLRRFPLPIVH----LDIKKCLLQMWC 193
            |..       :.|:|  :..|.|.|.||   |..:.   :...|.||:.    |..::.||.:
  Rat   257 LDSPAAQTCMNEYHLFFLLSGAFMGYSYSLLYFINN---MNYLPFPIIQQYKFLRFRRSLLLL-- 316

  Fly   194 HQLKTSAKAAIVPTLLFTVIY---------WPTMGF-----------LDTTELGGVTIGCCVIIT 238
              :|.|...::.....|.::|         |.:...           |||  :||        :.
  Rat   317 --VKHSCVESLFMVRNFCIVYYFFGHIPKAWISTALDLRTDEQAHRPLDT--IGG--------LL 369

  Fly   239 QPQRLFQAWLLATLILFKLN---IVPKFYG---LVLQRKLSLICDLRAL---------------- 281
            ....|:..||....:|....   |:.|.|.   |.||       ||..|
  Rat   370 NVSLLYHVWLCGVFLLMTWYISWILFKIYATEYLALQ-------DLMLLSQYSPSRRQEVFSLSQ 427

  Fly   282 -----HKCTGIN--LFNLIWDRFQ-------------YFFCTMRMKP------------MPKDMQ 314
                 |..|.|:  ..:|:.|..|             ..:.:..::|            .||..|
  Rat   428 PGGHPHNWTAISRECLSLLNDMTQKLVLYQEAAATNGRMYSSYSVEPKRLSSPEETAFQTPKPSQ 492

  Fly   315 RYTFSIPVAMALDTTEIYGFQLLAARDFYAAMSGSLYLDLFKMEIGLGNRNWRELRDIILEMVDA 379
                 :|....|..|.::..:|       :...||   ..|....|         ..::..|...
  Rat   493 -----MPSVPPLVKTSLFSPKL-------STPDGS---SPFGTPFG---------SSVVNRMAGI 533

  Fly   380 FLARMDSCLEPATPIKICHLLKNNKPKC------PQIRLLVKPTPPPKRFCVHSIRKGLWFRLPI 438
            |... ..|..|.:|     .|....|:.      .|:..:..|:|     |.....:|...|.|
  Rat   534 FDVN-TCCGSPQSP-----QLVRRGPRLWTHTSDQQVSAVSNPSP-----CASVTAEGKTVRQP- 586

  Fly   439 VSQYYS--------------------YLYDLDPLANLNHVLLCGEPLVWILQGLVSICVRLFKED 483
             |..||                    |.:...|.|::..|....:..:|.|:||..:....|.||
  Rat   587 -SVLYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTED 650

  Fly   484 KFVYIESDVDRILVYLLKVEEKLNE--------AKEMKVRGKLCSSHDR-----FMKAINRCLYK 535
            :|..:::.:..||..||.::|.:::        :|..:..|.|..:..:     |..::...:|:
  Rat   651 RFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRTSGSLVDTSYKTLRFAFRASLKTAIYR 715

  Fly   536 MLFTFSPYMDYI 547
            :..||..:::.:
  Rat   716 ITTTFGEHLNAV 727

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG32246	NP_729020.2	None
Ndc1	XP_038966223.1	Ndc1_Nup	124..738	CDD:401470	123/662 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4358
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D556184at2759
OrthoFinder	1	1.000	-	-		FOG0006443
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910