DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment t-Grip128 and tubgcp4

DIOPT Version :10

Sequence 1:NP_729045.1 Gene:t-Grip128 / 317930 FlyBaseID:FBgn0052232 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001128602.1 Gene:tubgcp4 / 557155 ZFINID:ZDB-GENE-081022-124 Length:668 Species:Danio rerio


Alignment Length:375 Identity:82/375 - (21%)
Similarity:140/375 - (37%) Gaps:111/375 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 FSVALRQLLRPVIEFLVHFERRLTSGLEPATLQH----FIETS--RGHLETIKLLYELSQNKNQE 478
            |:..|.:|.:..:..||.|| .|..|:.....:|    .:|.|  .|.|:.||..:.|.:.   |
Zfish   307 FAAELHRLKQQPLFSLVDFE-NLVDGIRSTVAEHLWTLMVEESDLLGQLKIIKDFFLLGRG---E 367

  Fly   479 LHSL------RSLKT---------LDTLFTKSSQKTQPKLLRSLSASLLLH-TVRAYCKFL---- 523
            |:.:      ..|||         ::..|.:::.|.   ||...:...||| |:..:.|..    
Zfish   368 LYQVFIDLAQHMLKTPPSAVTEHDVNVAFQQAAHKV---LLDDDNLLPLLHLTIDYHGKESKEGS 429

  Fly   524 -------------------DNWWSTGDFADYHEEFPFEKIVTDERTE-------YVLRKSLMQTE 562
                               ..|.:.|  ..|..::|...:.|....|       |:|....:|:|
Zfish   430 GNREGTTPPQESSPREAPPTGWAALG--LAYKVQWPLHILFTPAVLEKYNVVFRYLLSVRRVQSE 492

  Fly   563 LQNSELFRIIQRHLLESSDGVAILYDSRTISEFHTLHGIEPEIRLHNSLIDAVIGEIAPYQIKAI 627
            ||:....::.::| |:|:...|:.:                  ||.|.:  |.:.:...|.::..
Zfish   493 LQHCWALQMQRKH-LKSNQTDAVKW------------------RLRNHM--AFLVDNLQYYLQVD 536

  Fly   628 EASHYVPDILQQLQST-DHDGIR---------RLFYSFHMETRPDPRKPAGHSINELL---RNFL 679
            ........:|||:.|| |.:.||         .|..||.:      .||..|.:||:|   .|| 
Zfish   537 VLESQFSQLLQQINSTRDFESIRLAHDHFLSNLLAQSFIL------LKPVFHCLNEILDLCHNF- 594

  Fly   680 TCADYTPITEIISQEFQRLLNRRTRLVNSYISGL-LQEFQGYKVVRHLRS 728
             |:       ::||....|..|.|..::..:.|. .|.|..:|::..:|:
Zfish   595 -CS-------LVSQNLGSLDERGTAQLDILVKGFSRQSFLLFKILSSVRN 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
t-Grip128NP_729045.1 GCP5_NTD 10..121 CDD:454848
tubgcp4NP_001128602.1 GCP_N_terminal 2..347 CDD:465456 10/40 (25%)
GCP_C_terminal 350..656 CDD:461187 70/331 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.