DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32232 and Tubgcp4

DIOPT Version :9

Sequence 1:NP_729045.1 Gene:CG32232 / 317930 FlyBaseID:FBgn0052232 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_002729251.2 Gene:Tubgcp4 / 362203 RGDID:1306924 Length:667 Species:Rattus norvegicus


Alignment Length:594 Identity:114/594 - (19%)
Similarity:186/594 - (31%) Gaps:210/594 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 LTFFSVALRQLLRPVIEFLVHFERRLTSGLEPATLQHFIETSRGHLETIKLLYE-----LSQNKN 476
            |..|...|..:|:|..:.|:..|:...:  :|......:..|   |:..:||:.     :.|.|:
  Rat    86 LRAFCTGLDSVLQPYRQALLDLEQEFLA--DPHLSISHVNYS---LDQFQLLFPSVMVVVEQIKS 145

  Fly   477 QELHSLRSLKTLDTLFTKSSQKTQPKLLRSLSASLLLHTVRAYC-----KFLDNWWSTGDFADYH 536
            |::|   ..:.|:|::..|.....|  :||     .|..:.|.|     |.|..|...|...|.|
  Rat   146 QKIH---GCQILETVYKHSCGGLPP--VRS-----ALEKILAVCHGVMYKQLSAWMLHGLLLDQH 200

  Fly   537 EEFPFE----------KIVTDE----------------------RTEYVLRKSLMQTELQNSELF 569
            |||..:          ::..||                      ..|.:|..||.|..|:...|.
  Rat   201 EEFFIKQGPSSGNVSAQMEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILP 265

  Fly   570 RIIQRHLLESSDGVAILYDSRTISEFHT----------------------LHGI--EPEIRL--H 608
            ..|...:.|.     ||:...::..|..                      ||.:  :|...|  .
  Rat   266 SYIPVRVAEK-----ILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDF 325

  Fly   609 NSLIDAVIGEIAPYQIK-AIEASHYVPDILQQLQSTDHD---GIRRLFYSF-----HMETRPDPR 664
            ..::|.:...:|.:..| .:|.|    |:|.||:.....   |...||.:|     ||...| |.
  Rat   326 EQVVDGIRSTVAEHLWKLMVEES----DLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTP-PT 385

  Fly   665 KPAGHSINELLR-----------NFLTC-------------ADYTPITEIISQE----------- 694
            ....|.:|...:           |.|..             ||.|...|:.|:|           
  Rat   386 AVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKDHKADATQPREVPSRETSPREPPSSGW 450

  Fly   695 ----------------FQRLLNRRTRLVNSYISGL------LQEFQGYKVVR-HLRS-------- 728
                            |...:..:..:|..|:..:      ||.....::.| ||:|        
  Rat   451 AALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAVKW 515

  Fly   729 ------VFLLWNYDHFRSEFEFFFEFLRRKHLVEATNKLKHIVLCQDFTLGHMFKVCVTEAHPEF 787
                  .||:.|..::........:|.:..|.:.:|...:.|.|..|..|.::.........|.|
  Rat   516 RLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVF 580

  Fly   788 ICLR-----------------------------------VRNDTLLNRIISQQQMDMMNS-CFRL 816
            .||.                                   .|..:||.:|:|..:...:|| ..:|
  Rat   581 HCLNEILDLCHSFCSLVSQNLGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQL 645

  Fly   817 LLNLNFSHY 825
            ||.|:::.|
  Rat   646 LLRLDYNKY 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32232NP_729045.1 Spc97_Spc98 382..>559 CDD:282045 39/183 (21%)
Tubgcp4XP_002729251.2 Spc97_Spc98 4..573 CDD:282045 98/511 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353823
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19302
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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