DRSC/TRiP Functional Genomics Resources

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Protein Alignment t-Grip128 and Tubgcp4

DIOPT Version :10

Sequence 1:NP_729045.1 Gene:t-Grip128 / 317930 FlyBaseID:FBgn0052232 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_001386209.1 Gene:Tubgcp4 / 362203 RGDID:1306924 Length:667 Species:Rattus norvegicus


Alignment Length:594 Identity:114/594 - (19%)
Similarity:186/594 - (31%) Gaps:210/594 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 LTFFSVALRQLLRPVIEFLVHFERRLTSGLEPATLQHFIETSRGHLETIKLLYE-----LSQNKN 476
            |..|...|..:|:|..:.|:..|:...:  :|......:..|   |:..:||:.     :.|.|:
  Rat    86 LRAFCTGLDSVLQPYRQALLDLEQEFLA--DPHLSISHVNYS---LDQFQLLFPSVMVVVEQIKS 145

  Fly   477 QELHSLRSLKTLDTLFTKSSQKTQPKLLRSLSASLLLHTVRAYC-----KFLDNWWSTGDFADYH 536
            |::|   ..:.|:|::..|.....|  :||     .|..:.|.|     |.|..|...|...|.|
  Rat   146 QKIH---GCQILETVYKHSCGGLPP--VRS-----ALEKILAVCHGVMYKQLSAWMLHGLLLDQH 200

  Fly   537 EEFPFE----------KIVTDE----------------------RTEYVLRKSLMQTELQNSELF 569
            |||..:          ::..||                      ..|.:|..||.|..|:...|.
  Rat   201 EEFFIKQGPSSGNVSAQMEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILP 265

  Fly   570 RIIQRHLLESSDGVAILYDSRTISEFHT----------------------LHGI--EPEIRL--H 608
            ..|...:.|.     ||:...::..|..                      ||.:  :|...|  .
  Rat   266 SYIPVRVAEK-----ILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDF 325

  Fly   609 NSLIDAVIGEIAPYQIK-AIEASHYVPDILQQLQSTDHD---GIRRLFYSF-----HMETRPDPR 664
            ..::|.:...:|.:..| .:|.|    |:|.||:.....   |...||.:|     ||...| |.
  Rat   326 EQVVDGIRSTVAEHLWKLMVEES----DLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTP-PT 385

  Fly   665 KPAGHSINELLR-----------NFLTC-------------ADYTPITEIISQE----------- 694
            ....|.:|...:           |.|..             ||.|...|:.|:|           
  Rat   386 AVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKDHKADATQPREVPSRETSPREPPSSGW 450

  Fly   695 ----------------FQRLLNRRTRLVNSYISGL------LQEFQGYKVVR-HLRS-------- 728
                            |...:..:..:|..|:..:      ||.....::.| ||:|        
  Rat   451 AALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAVKW 515

  Fly   729 ------VFLLWNYDHFRSEFEFFFEFLRRKHLVEATNKLKHIVLCQDFTLGHMFKVCVTEAHPEF 787
                  .||:.|..::........:|.:..|.:.:|...:.|.|..|..|.::.........|.|
  Rat   516 RLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVF 580

  Fly   788 ICLR-----------------------------------VRNDTLLNRIISQQQMDMMNS-CFRL 816
            .||.                                   .|..:||.:|:|..:...:|| ..:|
  Rat   581 HCLNEILDLCHSFCSLVSQNLGPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQL 645

  Fly   817 LLNLNFSHY 825
            ||.|:::.|
  Rat   646 LLRLDYNKY 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
t-Grip128NP_729045.1 GCP5_NTD 10..121 CDD:454848
Tubgcp4NP_001386209.1 GCP_N_terminal 2..347 CDD:465456 55/280 (20%)
GCP_C_terminal 350..655 CDD:461187 56/306 (18%)
Blue background indicates that the domain is not in the aligned region.

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