DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IntS4 and SIEL

DIOPT Version :9

Sequence 1:NP_572488.1 Gene:IntS4 / 31793 FlyBaseID:FBgn0026679 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_187492.2 Gene:SIEL / 820027 AraportID:AT3G08800 Length:936 Species:Arabidopsis thaliana


Alignment Length:848 Identity:189/848 - (22%)
Similarity:316/848 - (37%) Gaps:236/848 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 DEISYEDVEMGELKEVASKIFQLYQLQERDSDTSIRVKLLELLSGL---GCECATEQALTMIIDY 177
            |.||.|.:.:..|..:.|.|.      ..|:..|:...:.:.|:||   |........|.::.| 
plant     9 DSISPESISLDTLASIRSLII------NADTSDSVISSVFDFLTGLLSRGNSAILHHVLKLLSD- 66

  Fly   178 FIFLLRKEVSQKVLAQGMMCLFR----IGERRKHMLPISYKTQVAHLAKEQLRSGSAHTQK---- 234
             :...|||::.::....:..|.|    :.|.......:.....:|.|: |:..|.:|...|    
plant    67 -LAFRRKELAPQIFDSILSNLLRLHNTVAEASHERAAVESLAVLASLS-ERTPSIAAALSKIDDE 129

  Fly   235 -----------NAMLVIGRFATKMEGERHYVWKLAFYIDSQD--SSVRAQALHALLTLGERG--S 284
                       ::.|.:.|.|.:.......::.| |...|:|  ..:|..||..|:.:...|  :
plant   130 VFASICLGAPISSRLWLLRNADRFNVPSSVLFTL-FLGFSKDPYPYIRKVALDGLINICNAGDFN 193

  Fly   285 QLPAV--LYKRAVEAMKDDYECVRKEALQLVFMLGNRHPDYILPSDRQQEELR--MIDAAFSKVC 345
            ...||  .|.||||.:.|..:.||..|::.|.:.|.     ::.:.:::|..|  ..||.|.::|
plant   194 HTHAVEGCYTRAVELLSDAEDSVRSSAVRAVSVWGK-----VMIASKEEEMNRRDCTDAVFLQLC 253

  Fly   346 EALCDLSLQIRVLAAELLGGMTAVSREFLHQTLDKKLMSNLRRKRTAHERGARLVASGEWSSGKR 410
            ..:.|:|:.:||...:..|.:...|...:.|||.||::            ||        ..||:
plant   254 SVVRDMSVDVRVEVFKAFGIIGTASESIILQTLSKKVL------------GA--------GKGKK 298

  Fly   411 WADDAPQEHLDAQSISIIASGACGALIHGLEDEFLEVRTAAVASMCKLALSRPDFAVTSLDFLVD 475
                 ||..|...|..:  |.|.|..|||.||||.|||.|||.|...|:::...|...::..|:|
plant   299 -----PQNLLSNGSADV--SSAAGVYIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLLMD 356

  Fly   476 MFNDEIEDVRLKAIYSLTAIAK--HIVLREDQLEIMLGSLEDYSVDVREGLHLMLGACRVSTQTC 538
            |..|:...|||||:.:|..||.  ::.::|..:...|.::.|.|.::|.....:|...::..   
plant   357 MLYDDYMVVRLKALKALHHIADLGNLKIQETYMPAFLDAIVDTSENIRVEARNILKLAKLPD--- 418

  Fly   539 LLMVVQKLLDVLAK----YPQDRNSTYACMRKIGQKHPHLV------------------------ 575
             |.:|.|.:|.:.|    ||||.....:.:...||.|.:.:                        
plant   419 -LKLVNKCIDGVLKSLEMYPQDEPDILSALFHFGQNHTNFLVSMVKRFSEKLGTASGSKAEFNSR 482

  Fly   576 -MAVAVHLLYVHPFFETPERDVEDP---AYLCVLILVFNAAEH-LVPIISLLPTATH-------- 627
             ::.::.|:...|...........|   :|...::..|::..| ::....||...||        
plant   483 QLSASLTLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSSGLHDMMDQDMLLAYLTHCAILSSSS 547

  Fly   628 ---------RHYAYLRDS------MPNLVP--QLPIEGASSASATH----------------RID 659
                     ..:|| |||      .|.|:|  .:|.|....|....                :|.
plant   548 GTEFNKGDVFFHAY-RDSNADLAGNPVLLPGKDIPAESKYMACKAELEIGNQALKFVNHILLKIK 611

  Fly   660 SA--MHQAGSSAEYLQMILSHIEEIFTMTDERLELLQTAQSNLQRLGSID--------------- 707
            :|  :.|:|.|.|.|:.:.:..:|:.|:         ||.|::.: |::|               
plant   612 AAWLLSQSGCSKEALRALRACKQELATL---------TADSSISK-GTLDFICQYVHVIELLVQV 666

  Fly   708 ------AGMYGTSNFLET-FLAAQIQIEQMQ-RC----ASTQRSRVPLKESLAALIRNCL----- 755
                  :....|.:.:|. .|..:::|:.|: ||    .||:.|.|     |..:|..||     
plant   667 WPHFNYSRHISTCSSVEVELLMEEVEIKLMEIRCRFTGLSTEESLV-----LELVIFGCLLRLYK 726

  Fly   756 -----------KLQHTFSGLNYGDILQVKQLRLRACALHLVLVVRDRSQSALGPCQMLLQTAGDI 809
                       ||..|.|.|.                ||       ..|....|...|.:|...:
plant   727 FEICCRLSCMEKLSSTISQLE----------------LH-------HEQQCTKPSDFLTETKKSL 768

  Fly   810 SEF 812
            .||
plant   769 EEF 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IntS4NP_572488.1 HEAT repeat 290..326 CDD:293787 11/35 (31%)
HEAT repeat 339..414 CDD:293787 18/74 (24%)
HEAT repeat 432..459 CDD:293787 16/26 (62%)
HEAT repeat 468..498 CDD:293787 12/31 (39%)
HEAT repeat 504..528 CDD:293787 4/23 (17%)
SIELNP_187492.2 HEAT <206..453 CDD:224331 80/282 (28%)
HEAT repeat 349..375 CDD:293787 10/25 (40%)
HEAT repeat 385..411 CDD:293787 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2259
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D256550at2759
OrthoFinder 1 1.000 - - FOG0006609
OrthoInspector 1 1.000 - - oto3851
orthoMCL 1 0.900 - - OOG6_104599
Panther 1 1.100 - - LDO PTHR20938
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4846
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.910

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