DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32225 and Lamp5

DIOPT Version :10

Sequence 1:NP_730511.1 Gene:CG32225 / 317926 FlyBaseID:FBgn0052225 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_083806.2 Gene:Lamp5 / 76161 MGIID:1923411 Length:280 Species:Mus musculus


Alignment Length:263 Identity:59/263 - (22%)
Similarity:104/263 - (39%) Gaps:51/263 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LSAFTTKTPRVSKYTTKSPSASSMNHDATASLYRFNATNGITCILMQVDGLISIKYRNKLNEDV- 106
            |..|......|::...::.|..|.|.:....:.|   .||.||::.:......:.|      || 
Mouse    18 LMFFHVMVQTVAEQEVENLSGLSTNPEKDIFVVR---ENGTTCLMAEFAAKFIVPY------DVW 73

  Fly   107 ----------EADLYMPDDPQLSGEC--VESNMEILTMDFKGFRLSMTFKK-----SSGGEG-WY 153
                      :|::.:....::.|.|  .||.:|:..:| ..:.|.|.|.|     |.|.|. |.
Mouse    74 ASNYVDLITEQAEISLTRGAEVKGHCGHNESELEVFWVD-HAYTLRMLFVKESHNTSKGPEATWN 137

  Fly   154 INLFELTYSSSNWL-FEHPDRPNLDVRLTSPAQTPMYFPTPVGKSYVCDKEQTVIMYAPHDSGDL 217
            :|.....|.||... |:.|.:.|   :..:.:.......||.|.||.|..:||:.:.:......:
Mouse   138 LNKVHFVYDSSEKTHFKAPVKVN---KYIASSHHLSALVTPAGMSYECQAQQTISLASSDPQKTV 199

  Fly   218 SGHIAKLYLRDMHMQ------SFMFKDSGKWGPSFHCSATGSYR-DETAPLAVGTALAIAVLLTI 275
            :     :.|..:|:|      .|:|.:..|      |......: :||.||.:|..|.:.:::|:
Mouse   200 T-----MILSAVHIQPFDIISDFVFSEEHK------CPVDEQEQLEETLPLILGLILGLVIVITL 253

  Fly   276 SGY 278
            ..|
Mouse   254 VIY 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32225NP_730511.1 Lamp 76..234 CDD:480752 41/183 (22%)
Lamp5NP_083806.2 Lamp 43..213 CDD:480752 41/187 (22%)

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