DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32225 and lamp2

DIOPT Version :10

Sequence 1:NP_730511.1 Gene:CG32225 / 317926 FlyBaseID:FBgn0052225 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001428472.1 Gene:lamp2 / 541406 ZFINID:ZDB-GENE-030729-9 Length:355 Species:Danio rerio


Alignment Length:294 Identity:64/294 - (21%)
Similarity:104/294 - (35%) Gaps:93/294 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SALLALFMTAAQGLQLSAFTTKTPRVSKY-----TTKSPSASSMNHDA--------------TAS 73
            ||.:........|...:..||:.|..:.:     ||.:|:.:..|...              |..
Zfish    96 SATVTTLAPTTTGHNTTNSTTEPPTTTGHNTTNSTTDAPTTTHTNATVAPTPPPTTPSVPKPTVG 160

  Fly    74 LYRFNATNGITCILMQVDGLISIKYR-NKLNEDVEADLYMPDDPQLSGECVESNME--------- 128
            .|.....|...|:|.::....|.|.. |...:.|..|   |:..:::|.|.....:         
Zfish   161 NYSVKTDNVSDCLLAKMGLQFSFKISGNASLQTVNLD---PNVTKVNGTCGSGGSDSSLFLTSKD 222

  Fly   129 -----ILTMDFKGFR---LSMTFKKSSGGEGWYINLFELTYSSSNWLFEHPDRPNLDVRLTSPAQ 185
                 :.|.|.:.||   |::|....:|      |:|    :.||        .||.:       
Zfish   223 ITVHFVFTNDSRKFRLHALTLTVDLGNG------NIF----NDSN--------TNLSL------- 262

  Fly   186 TPMYFPTPVGKSYVCDKEQTVIMYAPHDSGDLSGHIAKLYLR--DMHMQSFMFKDSGKWGPSFHC 248
                :...||.||:|.|||:      ::..|      ||.|.  ::.:|.|..| ...:..:..|
Zfish   263 ----WEASVGSSYMCRKEQS------YNISD------KLTLNTFELQVQPFDVK-KNSFSTAEDC 310

  Fly   249 SATGSYRDE----TAPLAVGTALAIAVLLTISGY 278
            .|     ||    ..|:|||.|||:.|::.:..|
Zfish   311 EA-----DEPDNFIVPIAVGVALAVLVVVVLLAY 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32225NP_730511.1 Lamp 76..234 CDD:480752 37/177 (21%)
lamp2NP_001428472.1 None

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