DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32225 and LAMP1

DIOPT Version :10

Sequence 1:NP_730511.1 Gene:CG32225 / 317926 FlyBaseID:FBgn0052225 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_005552.3 Gene:LAMP1 / 3916 HGNCID:6499 Length:417 Species:Homo sapiens


Alignment Length:246 Identity:59/246 - (23%)
Similarity:100/246 - (40%) Gaps:56/246 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 TPRVSKYTTKSPSASSMNHDATASLYRFNATNGITCILMQVDGLISIKYRNKLNEDVEADLYM-P 113
            :|..:.....|||.|.:....:...|..:.||| ||:|..:...:::.|..|.|..|...|.: |
Human   197 SPTTAPPAPPSPSPSPVPKSPSVDKYNVSGTNG-TCLLASMGLQLNLTYERKDNTTVTRLLNINP 260

  Fly   114 DDPQLSGECVESNMEILTMDFKGFRLSMTFKKSSGGEGWYINLFE--LTYSSSNWLFEHPDRPNL 176
            :....||.|   ...::|::..             .||..:.||:  :..|||.:..:     .:
Human   261 NKTSASGSC---GAHLVTLELH-------------SEGTTVLLFQFGMNASSSRFFLQ-----GI 304

  Fly   177 DVRLTSP-AQTPMY---------FPTPVGKSYVCDKEQTVIMYAPHDSGDLSGHIAKLYLRDMHM 231
            .:....| |:.|.:         ....||.||.|:.|:.|.:     :...|.:|.|::::    
Human   305 QLNTILPDARDPAFKAANGSLRALQATVGNSYKCNAEEHVRV-----TKAFSVNIFKVWVQ---- 360

  Fly   232 QSFMFK-DSGKWGPSFHCSATGSYRDETA---PLAVGTALAIAVLLTISGY 278
               .|| :.|::|....|     ..||.:   |:|||.|||..||:.:..|
Human   361 ---AFKVEGGQFGSVEEC-----LLDENSMLIPIAVGGALAGLVLIVLIAY 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32225NP_730511.1 Lamp 76..234 CDD:480752 36/170 (21%)
LAMP1NP_005552.3 First lumenal domain 29..194
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..221 5/23 (22%)
Hinge 195..227 6/29 (21%)
Lamp 221..365 CDD:460152 39/177 (22%)
Second lumenal domain 228..382 42/192 (22%)
TM_EGFR-like 381..411 CDD:213052 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.

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