Sequence 1: | NP_730456.2 | Gene: | CG32221 / 317924 | FlyBaseID: | FBgn0052221 | Length: | 432 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569047.1 | Gene: | SKIP2 / 836860 | AraportID: | AT5G67250 | Length: | 527 | Species: | Arabidopsis thaliana |
Alignment Length: | 399 | Identity: | 82/399 - (20%) |
---|---|---|---|
Similarity: | 150/399 - (37%) | Gaps: | 124/399 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 DLDPSSLLFIFKLLSLEDQLHLARCCR--IFRDAFLRLHRHDFQDVVDKDMSIRTLEDWRTFLWL 71
Fly 72 CGSRIGTLESHFDDDHPLQLLPMISRHCYRLKSISIYNATVARAQPYLLRMSSLEKVHVR----- 131
Fly 132 ------NYKSTSKDLIK---------AIGIHLPRVNSLSLESFERKELQEVRQFSEMLELGLYDD 181
Fly 182 VTASEFATI--------------------VKPMRKLRCL--------QLRNAKRFLTTSNLRMLA 218
Fly 219 TNCRHLEKLTFNDCDADLLVLPQFVNLKYLQLYCSEDMKTRLFKALAKSQCS-IQLEYLILHRKR 282
Fly 283 WIDEEQAQYISALKCLRWLVCKPRDDLCVHHLAKLSRLECLSIQSAREIG--ETQLSL--LVANN 343
Fly 344 ERLRYLNIC 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG32221 | NP_730456.2 | leucine-rich repeat | 197..223 | CDD:275381 | 6/33 (18%) |
leucine-rich repeat | 224..244 | CDD:275381 | 5/19 (26%) | ||
leucine-rich repeat | 245..272 | CDD:275381 | 5/27 (19%) | ||
leucine-rich repeat | 273..297 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 298..319 | CDD:275381 | 3/20 (15%) | ||
leucine-rich repeat | 320..345 | CDD:275381 | 9/28 (32%) | ||
leucine-rich repeat | 346..372 | CDD:275381 | 3/7 (43%) | ||
SKIP2 | NP_569047.1 | F-box-like | 45..>73 | CDD:403981 | 7/27 (26%) |
AMN1 | 82..295 | CDD:187754 | 49/258 (19%) | ||
leucine-rich repeat | 106..128 | CDD:275381 | 8/28 (29%) | ||
leucine-rich repeat | 135..160 | CDD:275381 | 3/24 (13%) | ||
leucine-rich repeat | 161..185 | CDD:275381 | 4/23 (17%) | ||
leucine-rich repeat | 239..264 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 265..288 | CDD:275381 | 7/34 (21%) | ||
leucine-rich repeat | 289..314 | CDD:275381 | 8/46 (17%) | ||
AMN1 | <311..>416 | CDD:187754 | 17/69 (25%) | ||
leucine-rich repeat | 315..342 | CDD:275381 | 5/31 (16%) | ||
leucine-rich repeat | 343..367 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 368..393 | CDD:275381 | 3/7 (43%) | ||
leucine-rich repeat | 394..418 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
1 | 0.960 |