DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32221 and VFB3

DIOPT Version :9

Sequence 1:NP_730456.2 Gene:CG32221 / 317924 FlyBaseID:FBgn0052221 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_567316.1 Gene:VFB3 / 826171 AraportID:AT4G07400 Length:554 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32221NP_730456.2 leucine-rich repeat 197..223 CDD:275381
leucine-rich repeat 224..244 CDD:275381
leucine-rich repeat 245..272 CDD:275381
leucine-rich repeat 273..297 CDD:275381
leucine-rich repeat 298..319 CDD:275381
leucine-rich repeat 320..345 CDD:275381
leucine-rich repeat 346..372 CDD:275381
VFB3NP_567316.1 F-box-like 74..>104 CDD:289689
leucine-rich repeat 89..114 CDD:275381
leucine-rich repeat 115..165 CDD:275381
AMN1 <146..>226 CDD:187754
leucine-rich repeat 166..191 CDD:275381
leucine-rich repeat 192..216 CDD:275381
leucine-rich repeat 268..293 CDD:275381
leucine-rich repeat 294..317 CDD:275381
leucine-rich repeat 318..343 CDD:275381
AMN1 <340..>463 CDD:187754
leucine-rich repeat 344..371 CDD:275381
leucine-rich repeat 372..396 CDD:275381
leucine-rich repeat 397..422 CDD:275381
leucine-rich repeat 423..447 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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