DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32221 and VFB2

DIOPT Version :9

Sequence 1:NP_730456.2 Gene:CG32221 / 317924 FlyBaseID:FBgn0052221 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_566928.1 Gene:VFB2 / 824170 AraportID:AT3G50080 Length:522 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32221NP_730456.2 leucine-rich repeat 197..223 CDD:275381
leucine-rich repeat 224..244 CDD:275381
leucine-rich repeat 245..272 CDD:275381
leucine-rich repeat 273..297 CDD:275381
leucine-rich repeat 298..319 CDD:275381
leucine-rich repeat 320..345 CDD:275381
leucine-rich repeat 346..372 CDD:275381
VFB2NP_566928.1 F-box-like 42..>71 CDD:403981
AMN1 <119..>187 CDD:187754
leucine-rich repeat 133..158 CDD:275381
leucine-rich repeat 159..183 CDD:275381
leucine-rich repeat 233..258 CDD:275381
leucine-rich repeat 259..282 CDD:275381
AMN1 263..>410 CDD:187754
leucine-rich repeat 283..308 CDD:275381
leucine-rich repeat 309..336 CDD:275381
leucine-rich repeat 337..361 CDD:275381
leucine-rich repeat 362..387 CDD:275381
leucine-rich repeat 388..412 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

Return to query results.
Submit another query.