Sequence 1: | NP_001245581.1 | Gene: | Nrg / 31792 | FlyBaseID: | FBgn0264975 | Length: | 1309 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996816.3 | Gene: | USH2A / 7399 | HGNCID: | 12601 | Length: | 5202 | Species: | Homo sapiens |
Alignment Length: | 1309 | Identity: | 264/1309 - (20%) |
---|---|---|---|
Similarity: | 421/1309 - (32%) | Gaps: | 435/1309 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 KGNRPPRITK-------------QP--APGELLFKVAQQN--------------KESDNPF---- 55
Fly 56 ----------------IIECEADGQPEP--------------EYSWI----KNGKKFDWQAYDNR 86
Fly 87 MLRQPGRGTLVITIPKDEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPF 151
Fly 152 MLKC--AAPDG---------FPSPTVN--WMIQESIDGSIKSINNSRMTLDPEGNLWFSNVTRED 203
Fly 204 ASSDFYYACSATSVFRSEYKIGNKVLLD---VKQMGVSASQNKHPPVRQYVSRRQSLALRGKRME 265
Fly 266 LFCIYGGTPLPQ-----TVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDD-------AGTYTCD 318
Fly 319 VSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQST 383
Fly 384 PNPRRTVTDNTIRIIN--------------------------LVKGDT------GNYGCNATNSL 416
Fly 417 GYVYKDVYLNVQAE-PPTISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLRASNWLTGGRYNV- 479
Fly 480 -QANGDLEIQDVTFSD-------------------AGKYTCY-----AQNKFGEIQADGSLVVKE 519
Fly 520 HTRITQEP---QNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNSLTI 581
Fly 582 AKTMELDSG---EYTCVAR----TRLD---------EATARAN--------LIVQDVPNAPKL-- 620
Fly 621 TGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWD----AAYEKVPNTD-----SSFVV 676
Fly 677 Q---MSPWANYTFRVIAFNKIGASPPSAHSDSC-----TTQPDVPFKNPDNVVGQGTEPNNLVIS 733
Fly 734 WTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNI---FDWRQNNIVIA---DQPTFVKYLIKVVA 792
Fly 793 INDRGESNVAAEEVVGYSGEDRPLDA----------PTNFTMRQ------------ITSSTSGYM 835
Fly 836 AWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSK-NYARILAYNGR 899
Fly 900 FNGPPSAVIDFD-TPEGVPSPVQGLDAYPLGSSAFMLHWKKPLYPNGKLTGYKIYYEEVKESYVG 963
Fly 964 ERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEGSEHYIEKTTLKDAVNVAPATPSFS 1028
Fly 1029 WEQLPSDNGLAKFRINWLP--STEGHPGTH-FFTMHRIKGETQWIRENEEKNSDYQE---VGGLD 1087
Fly 1088 PETAYEFRV 1096 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrg | NP_001245581.1 | Ig | 55..128 | CDD:299845 | 21/110 (19%) |
IG_like | 57..127 | CDD:214653 | 19/87 (22%) | ||
Ig | 135..214 | CDD:299845 | 23/91 (25%) | ||
IG_like | 141..216 | CDD:214653 | 21/87 (24%) | ||
ig | 251..332 | CDD:278476 | 16/92 (17%) | ||
I-set | 339..427 | CDD:254352 | 27/119 (23%) | ||
Ig | 354..427 | CDD:299845 | 22/104 (21%) | ||
I-set | 432..517 | CDD:254352 | 23/110 (21%) | ||
Ig | 446..517 | CDD:299845 | 18/96 (19%) | ||
I-set | 522..611 | CDD:254352 | 22/115 (19%) | ||
ig | 525..609 | CDD:278476 | 21/110 (19%) | ||
FN3 | 613..707 | CDD:238020 | 20/112 (18%) | ||
FN3 | 716..807 | CDD:238020 | 18/96 (19%) | ||
fn3 | 817..905 | CDD:278470 | 21/110 (19%) | ||
FN3 | 917..1004 | CDD:238020 | 21/86 (24%) | ||
FN3 | 1041..1111 | CDD:238020 | 18/62 (29%) | ||
Bravo_FIGEY | 1155..>1221 | CDD:290593 | |||
USH2A | NP_996816.3 | LamGL | 146..283 | CDD:214722 | |
Laminin_N | 291..516 | CDD:413488 | |||
EGF_Lam | 517..565 | CDD:238012 | |||
EGF_Lam | 574..639 | CDD:238012 | |||
Laminin_EGF | 641..691 | CDD:395007 | |||
EGF_Lam | 694..733 | CDD:214543 | |||
Laminin_EGF | 747..795 | CDD:395007 | |||
EGF_Lam | 794..844 | CDD:238012 | |||
EGF_Lam | 847..897 | CDD:214543 | |||
EGF_Lam | 900..948 | CDD:238012 | |||
EGF_Lam | 950..1000 | CDD:238012 | |||
EGF_Lam | 1001..>1037 | CDD:238012 | |||
fn3 | 1058..1132 | CDD:394996 | |||
fn3 | 1150..1227 | CDD:394996 | |||
FN3 | 1242..1357 | CDD:238020 | |||
FN3 | 1368..1451 | CDD:214495 | |||
LamG | 1519..1678 | CDD:238058 | |||
LamG | 1716..1868 | CDD:238058 | |||
FN3 | 1956..2051 | CDD:238020 | |||
FN3 | 2241..2313 | CDD:238020 | |||
FN3 | 2329..2428 | CDD:238020 | |||
FN3 | 2432..2528 | CDD:238020 | |||
FN3 | 2533..2619 | CDD:238020 | |||
FN3 | 2621..2719 | CDD:238020 | |||
FN3 | 2724..2799 | CDD:238020 | |||
FN3 | 2818..2920 | CDD:238020 | |||
FN3 | 2925..3015 | CDD:238020 | |||
FN3 | 3026..>3087 | CDD:238020 | |||
FN3 | <3449..3494 | CDD:238020 | |||
FN3 | 3503..3586 | CDD:238020 | 11/82 (13%) | ||
FN3 | 3590..3676 | CDD:238020 | 24/107 (22%) | ||
FN3 | 3680..3767 | CDD:238020 | 20/91 (22%) | ||
fn3 | 3777..3856 | CDD:394996 | 17/87 (20%) | ||
FN3 | 3866..3960 | CDD:238020 | 23/111 (21%) | ||
FN3 | 3964..4057 | CDD:238020 | 23/108 (21%) | ||
fn3 | 4161..4247 | CDD:394996 | 15/86 (17%) | ||
FN3 | 4268..4351 | CDD:238020 | 23/122 (19%) | ||
fn3 | 4357..4428 | CDD:394996 | 16/84 (19%) | ||
FN3 | 4444..4516 | CDD:238020 | 20/84 (24%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 4518..4541 | 6/24 (25%) | |||
FN3 | 4529..4627 | CDD:238020 | 22/81 (27%) | ||
FN3 | 4636..4730 | CDD:238020 | |||
FN3 | 4826..4927 | CDD:238020 | |||
PDZ-binding | 5200..5202 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3513 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |