DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrg and cntn3a.1

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_697914.4 Gene:cntn3a.1 / 569437 ZFINID:ZDB-GENE-081030-10 Length:1028 Species:Danio rerio


Alignment Length:1076 Identity:303/1076 - (28%)
Similarity:479/1076 - (44%) Gaps:126/1076 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LLVALLCAGSAESKGNRP--PRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIK 73
            |||..|..|.. |.|:.|  |..|||  ||.::|.:  ...|........|||.|:|.|.|.|..
Zfish     7 LLVLQLFMGCL-SDGSGPLRPVFTKQ--PGSIVFPL--HLNEPSREVTFSCEAQGRPPPSYRWKM 66

  Fly    74 NGKKFDWQAYDNRMLRQPGR------GTLVIT-IPKDEDRGHYQCFASNEFGTATSNSVYVRKAE 131
            |         |:.:..|||.      |.|.|: :.|:||.|.|||.|||.|||..|....:..|.
Zfish    67 N---------DSFISPQPGSRYSISGGNLRISQLNKEEDAGIYQCLASNSFGTILSREASLHIAY 122

  Fly   132 LNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSINNSRMTLDPEGNLWF 196
            |..||.:....:...||:..:|.|..|......|.:|:..|.  .|....:..|......|||:.
Zfish   123 LEEFKTQMRSPVRVREGQGVVLLCGPPAYMGELTFSWIFNEY--PSFVEQDTRRFVSQKTGNLYI 185

  Fly   197 SNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPPVRQYVSRRQSLAL-R 260
            :.|...|..:   |.|..|:........|....|.::..|:....  .|.:.  |...:.||: :
Zfish   186 AKVEPSDVGN---YTCVVTNTVTQNRVQGPPTPLILRSDGIMGEY--EPKIE--VQFPEVLAVAK 243

  Fly   261 GKRMELFCIYGGTPLPQTVWSK-DGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTYTCDVSN--- 321
            |..::|.|...|.|:|...|.: ||  :.:..::........|.|.....:|||.|.|...|   
Zfish   244 GLTVKLECFALGNPVPAISWRRPDG--VPFPRKVDVSKSSGVLEIPYFQQEDAGPYECVAENSRG 306

  Fly   322 ---GVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIEQST 383
               |.|.       |:..:.|:..::|:....|.||.:::||:|:..|:|...|:.||:|:|.. 
Zfish   307 KNTGKGR-------LSFYAPPHLVEKPQDVQRAIDESLLWECKASAKPKPSYRWLKNGEPLESF- 363

  Fly   384 PNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DG 446
             ..|..|.:..:.|.:|...|||.|.|.|.|..|.|:.:..|.|.|..|..|.:.....|:  .|
Zfish   364 -EDRIQVINGALSISSLTLSDTGMYQCIAENRHGRVFANAELRVIAVAPDFSNSVLKAQTLARQG 427

  Fly   447 RNVTIKCRVNGSPKPLVKW------LRASNWLTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNK 505
            .:|.|:||...||:.::.|      ||.|:     |.:|..||.|.|.::|..|||.|||.|:|:
Zfish   428 GDVLIECRPRMSPRGMISWRKGKEALRESH-----RVSVLDNGSLRISNITKLDAGLYTCVARNQ 487

  Fly   506 FGEIQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPR 570
            ||...:.|:|||||.|.||.:....:|..|:|....|..:.|.:|::...|:.:.|.|:|.:...
Zfish   488 FGVASSAGTLVVKEPTIITSKATQLDVTVGESVVIPCQVSRDPSLDVRFTWFFNEQLINFGSHGG 552

  Fly   571 FVK----TNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPKLTGITCQADKAE 631
            :.:    .:...:.|.......:|.|||..:|::|.|:...:::|:..|:.|    :..:.|:..
Zfish   553 YFEKVGGASAGDIMIRNIQLRHAGRYTCAVQTKVDSASIATDVVVRGPPDPP----LDIRVDEVT 613

  Fly   632 -----IHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNT-----DSSFVVQMSPWANYTF 686
                 :.|....||.||:..|.||..:.|: ..|.|| :.||.:     .|:.||::|||..|.|
Zfish   614 ETTSFVSWSPGPDNHSPVFAYNIQIRSPFS-LGWQAA-KTVPESLGGQQSSARVVELSPWVEYEF 676

  Fly   687 RVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYV 751
            ||:|.|.||...|:..|....|:..:|...|..|.|.|...:.|||:|.|:||.:...|.|.|.|
Zfish   677 RVLATNSIGTGEPTKPSQKIRTKDTMPRITPARVSGGGGSRSELVITWEPVPEEQQAGPGFGYVV 741

  Fly   752 SWKRDIPAAAWENNNIFDWRQNNIVIADQ----------PTFVKYLIKVVAINDRGESNVAAEEV 806
            :::   |....      :|.|..:...|.          |.|..:.:||...|::||........
Zfish   742 AFR---PLGGQ------NWMQAAVTSPDASRYIFKNDSIPPFSPFHVKVGVYNNKGEGPFGPVTT 797

  Fly   807 VGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGLREIHV 871
            : ||.|:.|..||:....:.: |::...::|.|:...:.|....||:::.|:..:..:....:..
Zfish   798 I-YSAEEEPSRAPSRIRAKSL-SASEVEVSWKPLPWSTSRTRIMGYELRYWSTKDRPDTASVMRT 860

  Fly   872 KGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVP--SPVQGLDAYPLGSSAFM 934
            .|:..:|::....|.|....::.|||....||.|||::..|....|  |||:.:  :....|..:
Zfish   861 VGNRTSAVIRGLDPSSTYNIKLKAYNSAGVGPDSAVVNVTTKRPPPSQSPVKVM--WNTTDSKLI 923

  Fly   935 LHWK--KPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKPNSKYRISITA 997
            |.|.  |.|....::.|||:.|:        :.|:..|.:.:...|.:::: |..:..|.|.|..
Zfish   924 LKWDHVKALENESEVMGYKVMYK--------QSRQTRPSVVETNSTSLELS-LPVDEDYIIQIKP 979

  Fly   998 TTKMGEGS---EHYIEKTTLKDAVNVAP---ATPSF 1027
            .::.||||   :..|.:..:..|:..||   |.|.|
Zfish   980 VSEGGEGSSSKQITIPRIAVAHAIGFAPERKALPVF 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 30/79 (38%)
IG_like 57..127 CDD:214653 30/76 (39%)
Ig 135..214 CDD:299845 19/78 (24%)
IG_like 141..216 CDD:214653 17/74 (23%)
ig 251..332 CDD:278476 22/88 (25%)
I-set 339..427 CDD:254352 29/87 (33%)
Ig 354..427 CDD:299845 25/72 (35%)
I-set 432..517 CDD:254352 33/92 (36%)
Ig 446..517 CDD:299845 30/76 (39%)
I-set 522..611 CDD:254352 20/92 (22%)
ig 525..609 CDD:278476 18/87 (21%)
FN3 613..707 CDD:238020 33/103 (32%)
FN3 716..807 CDD:238020 26/100 (26%)
fn3 817..905 CDD:278470 18/87 (21%)
FN3 917..1004 CDD:238020 21/90 (23%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
cntn3a.1XP_697914.4 I-set 26..120 CDD:254352 38/106 (36%)
Ig 26..117 CDD:299845 38/103 (37%)
Ig 122..217 CDD:299845 22/99 (22%)
IG_like 132..206 CDD:214653 18/78 (23%)
Ig 229..317 CDD:299845 24/98 (24%)
I-set 229..309 CDD:254352 21/83 (25%)
I-set 320..406 CDD:254352 29/87 (33%)
Ig 323..406 CDD:299845 28/84 (33%)
IG_like 421..499 CDD:214653 31/82 (38%)
Ig 427..499 CDD:299845 30/76 (39%)
IG_like 514..597 CDD:214653 18/82 (22%)
Ig 518..601 CDD:299845 17/82 (21%)
FN3 601..698 CDD:238020 33/102 (32%)
FN3 707..799 CDD:238020 26/101 (26%)
FN3 808..901 CDD:238020 21/93 (23%)
FN3 916..994 CDD:238020 20/86 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10556
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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