DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrg and chl1a

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_021325513.1 Gene:chl1a / 566148 ZFINID:ZDB-GENE-090313-201 Length:1310 Species:Danio rerio


Alignment Length:1338 Identity:385/1338 - (28%)
Similarity:593/1338 - (44%) Gaps:191/1338 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAALLVALLCAGSAESKG-NRPPRITKQPAPGELLFKVAQQNKES------DNPFIIECEADGQP 65
            |.:|.|.||.|..:.:.| ..||.:.:.|.       :..|...:      |..:|.:|||.|.|
Zfish     4 LRSLSVGLLSAFFSTTFGLYFPPHVEQLPT-------ITAQTSGTIIALPYDERYIFKCEAKGNP 61

  Fly    66 EPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPKDEDR--GHYQCFASNEFGTATSNSVYVR 128
            .|.:.|.|:|..|| ...|.::..:...||..|...||:.:  |.|:|:|||:.|||||......
Zfish    62 RPTFRWTKDGMDFD-PHKDPQVTTEENTGTFEIPNKKDKVKYQGKYRCYASNKLGTATSEEAEFI 125

  Fly   129 KAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSI-NNSRMTLDPEG 192
            ...:..|..|..:.:...||:..:|:|..|.|.|...:.||..:     ::.| .|.|:::...|
Zfish   126 VPMVPKFPKEKIEPIVVTEGDSVVLECNPPQGIPPWQLYWMTND-----LRHIEQNERVSMGLSG 185

  Fly   193 NLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVL----------LDVKQMGVSAS--QNKHP 245
            ||:|||....|:..|  |.|     |.|.:||...|.          :|.||....|.  |.:.|
Zfish   186 NLYFSNTLVSDSHDD--YCC-----FASFFKIRTIVQKPRMVLKVKPVDAKQEDGDAKIVQERKP 243

  Fly   246 PVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSD---RITQGHYGKSLVIRQT 307
            .:....|...:...:|:.:||.||..|.|.|:..|.|     .|.|   |....::||.|.|...
Zfish   244 SILVPSSHSTTFLKKGEELELECIAEGLPTPEVEWIK-----IWGDLPKRTQIKNFGKLLTIPNI 303

  Fly   308 NFDDAGTYTCDVSNGVG-NAQSFSIILNVNSVPYFTKEP---EIATAAEDEEVVFECRAAGVPEP 368
            ..:|.|.|.|...|..| :...|.:  .|...|.:.|||   ::|....|  :...|.|.|.|:|
Zfish   304 REEDEGKYMCKAKNQHGEDVHHFQV--EVEEPPSWQKEPLKSQLAWIGSD--IHINCSATGKPQP 364

  Fly   369 KISWIHNGKPIEQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPT 433
            .|:|..||||:: ..|:....:.|:.|.|:...:.||..|.|.|:|..|.:..:..:.|...||.
Zfish   365 TITWKRNGKPLD-DFPSTHHKMLDDRIIILKAEQKDTAVYQCEASNKHGSLLANANVLVMNHPPL 428

  Fly   434 I-SEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLR--ASNWLTGGRYNVQANGDLEIQDVTFSDA 495
            | :......:|:.|::|.:.|.|..||...:.|.|  ....:.|.||::..||.|:|..|...|.
Zfish   429 ILTRNYLEYATMLGKSVIMDCNVFSSPPATLNWRREDPEGSVDGERYSLLKNGSLQIHKVEMEDM 493

  Fly   496 GKYTCYAQNKFGEIQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTL--EIEIDWWK 558
            |:|.|.|.|..|.......|.:|:.|||.:.||:.:|..|..|...|....|.:|  |:|..|.|
Zfish   494 GQYKCLANNSEGTASITTELFIKDSTRIVEAPQDMKVIRGSVAELECQVECDPSLRRELEFVWLK 558

  Fly   559 DGQSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQDVPNAPKLTGI 623
            ||.:|...:..|:. |::..|.|......|.|.|||:.||.||:.||.|.:.|.|||:.|....:
Zfish   559 DGINILSNSSERYF-TDEGILQIFNVSHSDQGNYTCIVRTSLDQDTASAYITVLDVPDPPVELLL 622

  Fly   624 TCQADKA-EIHWEQQGDNRSPILHYTIQFNTS-FTPASWDAAYEKVPNTDSSFVVQMSPWANYTF 686
            :...|:: ::||....|:.|||..:.||:..| :.|..|.... :|.:...|..:.:....||.|
Zfish   623 SDLKDRSVKLHWVNTSDHNSPITEFIIQYEESHWEPEKWKDLL-RVSSRKFSAPLALYCHINYQF 686

  Fly   687 RVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYV 751
            ||||.|:||.|.||..|....|.|..|.:||:|:..:|..|:.:.|||.|:..:|||.|...|.:
Zfish   687 RVIAVNEIGRSHPSMPSGRYKTPPCAPDRNPENIKIEGHLPHQMDISWEPLLPVEHNGPGLEYKL 751

  Fly   752 SWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED--- 813
            |::......:|:...:   ::::.|:.|.||||.|.:|:.|.|..|.: ...:.|.||||||   
Zfish   752 SYRLLGVEDSWKEQMV---KRHSFVVRDTPTFVPYEVKIQAFNRHGWA-PGPKVVTGYSGEDFDI 812

  Fly   814 ---------RPLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTW------TENEGE 863
                     .||.||.|.: .::.:||...::|:||.:.::|||..||.:..|      |..:..
Zfish   813 WHCLEGDATVPLVAPDNVS-AEVLNSTLLKVSWSPVPQTTLRGHLGGYTVNYWQTQSLLTSKKIP 876

  Fly   864 EGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPL 928
            ...:.:.:.|:..:.:|...||.|:....:..:|.|.|||.|:.|.|.||:|||.....|.|...
Zfish   877 SERQSLTIPGNRSHTMVPGLKPFSEYSLTVNVFNRRGNGPSSSPISFTTPQGVPEQPHYLKATNF 941

  Fly   929 GSSAFMLHWKKPLYPNGKLTGYKIYYEEVKES-YVGERREYDPHITDPRVTRMKMAGLKPNSKYR 992
            ...|..|.|..|...||.||||.:.|:.|.:: .:||....  :|:....|:..:..|:.::.|:
Zfish   942 QKDAITLVWAPPHETNGHLTGYLLQYQTVVDNETLGELNSV--NISGADTTQWVLRDLQEDNSYK 1004

  Fly   993 ISITATTKMGEGSEHYIEKTTLKDAVNVAPAT---PSFS---------WEQ-------------- 1031
            ..::|.|::|.||       .:.:.....||.   |.:|         |.:              
Zfish  1005 FYLSACTQVGCGS-------AISEKGGTDPAAFTKPEYSFPEVSTVSAWTESYELSTSEVTTSEL 1062

  Fly  1032 ------------LPSDN---------GLAKF------RINWLPSTEG-HPGTHFFTM---HRIKG 1065
                        :|..|         .::.|      ||:|  .|.| |..:..:..   ||   
Zfish  1063 RQPFSFTSSNTDIPFVNATFSTLVVLNVSTFVRDTSARISW--RTRGEHSDSQLYVAIMNHR--- 1122

  Fly  1066 ETQW-IRENEEKNSDYQEVGGLDPETAYEFRV-----VSVDGHFNTESATQEIDTNTVEGPIMVA 1124
            :..| :.|....:..:..|.||.|.|.|..|:     |.|...|.....|::..          :
Zfish  1123 DGIWQLSEALNTSKGFHLVEGLSPGTVYTVRLQASRRVGVPSIFEEVFKTRKAS----------S 1177

  Fly  1125 NETVANAGWFIGMMLALAFIIILFIIICIIRRNRGGKYDVHDRELANGRRDYPEEGGFH-----E 1184
            .:.:.:..||:|||.|:|.:.:|.:|.|.:.:|:||||.|.::|  |...| ||..|..     |
Zfish  1178 RQEMGSQEWFVGMMCAVALLTLLVLIGCFVLKNKGGKYAVKEKE--NIPAD-PESHGMDEETPCE 1239

  Fly  1185 YSQPLDNKSAGRQSVSSANKPGVESD-TDSMAEYGDGD 1221
            ||   ||.....:|.....:...|.| ::..:|..:.|
Zfish  1240 YS---DNDEKPLKSSQQLFRDATEDDRSEDSSEISEDD 1274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 29/74 (39%)
IG_like 57..127 CDD:214653 28/71 (39%)
Ig 135..214 CDD:299845 24/79 (30%)
IG_like 141..216 CDD:214653 22/75 (29%)
ig 251..332 CDD:278476 25/84 (30%)
I-set 339..427 CDD:254352 28/90 (31%)
Ig 354..427 CDD:299845 22/72 (31%)
I-set 432..517 CDD:254352 27/87 (31%)
Ig 446..517 CDD:299845 24/72 (33%)
I-set 522..611 CDD:254352 33/90 (37%)
ig 525..609 CDD:278476 31/85 (36%)
FN3 613..707 CDD:238020 32/95 (34%)
FN3 716..807 CDD:238020 27/90 (30%)
fn3 817..905 CDD:278470 25/93 (27%)
FN3 917..1004 CDD:238020 24/87 (28%)
FN3 1041..1111 CDD:238020 22/85 (26%)
Bravo_FIGEY 1155..>1221 CDD:290593 21/71 (30%)
chl1aXP_021325513.1 Ig 54..125 CDD:325142 28/71 (39%)
Ig 129..222 CDD:325142 29/104 (28%)
Ig 262..331 CDD:325142 23/75 (31%)
Ig 349..422 CDD:325142 23/75 (31%)
IG 440..515 CDD:214652 24/74 (32%)
I-set 520..610 CDD:333254 33/90 (37%)
FN3 614..703 CDD:238020 29/89 (33%)
fn3 717..797 CDD:306538 26/83 (31%)
fn3 826..918 CDD:306538 25/92 (27%)
FN3 930..1016 CDD:238020 24/87 (28%)
FN3 1092..1172 CDD:238020 21/84 (25%)
Bravo_FIGEY 1209..1290 CDD:316405 22/72 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 60 1.000 Domainoid score I10538
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 549 1.000 Inparanoid score I1108
OMA 1 1.010 - - QHG47974
OrthoDB 1 1.010 - - D208655at33208
OrthoFinder 1 1.000 - - FOG0000777
OrthoInspector 1 1.000 - - otm24295
orthoMCL 1 0.900 - - OOG6_101169
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X532
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.740

Return to query results.
Submit another query.