DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrg and Cntn6

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_037357.1 Gene:Cntn6 / 27256 RGDID:62008 Length:1028 Species:Rattus norvegicus


Alignment Length:1077 Identity:308/1077 - (28%)
Similarity:484/1077 - (44%) Gaps:123/1077 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWRQSTILAALLVALL-----CAGSAESKGNRPPRITKQPAPGELLFKVAQQNKESDNPFIIECE 60
            :|:        ||.||     |||  ||:..||..|.:   |.:::|.:.....|    .|:.|.
  Rat     4 LWK--------LVILLPLINSCAG--ESRFTRPIFIQE---PQDVIFPLDLSRSE----IILSCT 51

  Fly    61 ADGQPEPEYSWIKNGKKFDW-QAYDNRMLRQPGRGTLVITIPK-DEDRGHYQCFASNEFGTATSN 123
            |.|.|.|.|.|.:||...|: ..|..|:    ..|:|.|:.|: |:|.|.|||.|:|..||..|.
  Rat    52 ASGYPSPHYRWKQNGTDIDFSMTYHYRL----DGGSLAISSPRTDQDIGIYQCLATNPVGTILSR 112

  Fly   124 SVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPTVNW-------MIQESIDGSIKSI 181
            ...::.|.:..|:.::..|:...||:..:|.|..|..|...:.:|       .:||         
  Rat   113 KAKLQFAYIEDFETKSRSTVSVREGQGVVLLCGPPPHFGELSYDWTFNDNPLYVQE--------- 168

  Fly   182 NNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKHPP 246
            :..|......|||:.:.|...|..:   |.|..|:........|....|..:..||.........
  Rat   169 DKRRFVSQNTGNLYIAKVEPSDVGN---YTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIE 230

  Fly   247 VRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSK-DGQRIQWSDRITQGHYGKSLVIRQTNFD 310
            || :....|  |.:...::|.|...|.|:|...|.: ||..:  ..::...:...:|.|.:...:
  Rat   231 VR-FPETIQ--AAKDSSVKLECFALGNPVPDISWRRLDGSPM--PGKVKYSNSQATLEIPKFQQE 290

  Fly   311 DAGTYTCDVSNGVG-NAQSFSIILNVNSVPYFTKEPEIATAAED------EEVVFECRAAGVPEP 368
            |.|.|.|...|..| |.....:|        |...||.....::      :.:.:||:|:|.|.|
  Rat   291 DEGFYECVAGNLRGRNLAKGQLI--------FYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNP 347

  Fly   369 KISWIHNGKPIEQSTPNPRRTVTDNTIRIINLVK-GDTGNYGCNATNSLGYVYKDVYLNVQAEPP 432
            ..:|:.||:.:.    ...|..|:|...||.::. .|:|.|.|.|.|....:|.:..|.|.|..|
  Rat   348 SYTWLKNGERLN----TEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAP 408

  Fly   433 TISEAP-AAVSTVD-GRNVTIKCRVNGSPKPLVKWLRAS-NWLTGGRYNVQANGDLEIQDVTFSD 494
            ..|:.| ..:|.|. |.:::|:|:.|..||..:.|.|.: |.....|.....:|.|:|.:||.||
  Rat   409 DFSKNPIKKISVVQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSD 473

  Fly   495 AGKYTCYAQNKFGEIQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKD 559
            ||.|||.|.|:||..::.|||:|||.|.||..|...:|..|:|....|..:||.|:|:...|:.:
  Rat   474 AGSYTCVATNQFGNGKSSGSLIVKERTVITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFN 538

  Fly   560 GQSIDF-EAQPRFVKTNDNSL--TIAKTMEL-DSGEYTCVARTRLDEATARANLIVQDVPNAP-- 618
            |..||. :....|.:....|:  .:.:.::| .||:|.|..:|.|:..:|.|::||:..|..|  
  Rat   539 GDVIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLERLSAVADIIVRGPPGPPED 603

  Fly   619 -KLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVP-----NTDSSFVVQ 677
             |:..|:  :..:::.|....||.|||..:|||..|.|: ..|.|. ..||     .|.::.|:.
  Rat   604 VKVEHIS--STTSQLSWRPGPDNNSPIQIFTIQTRTPFS-VGWQAV-ATVPEILNGQTYNATVIG 664

  Fly   678 MSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEH 742
            :|||..|.|||:|.|.||...||..|:...|:..:|...|.|:.|.|...:.|||:|.|:||...
  Rat   665 LSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASIPNVAPVNINGGGGSRSELVITWEPIPEELQ 729

  Fly   743 NAPNFHYYVSWKRDIPAAAWENNNI-------FDWRQNNIVIADQPTFVKYLIKVVAINDRGESN 800
            |...|.|.:.: |.:.:..|....:       |.:|..:|:     ....:.:||...|:.||.:
  Rat   730 NGEGFGYIIMF-RPVGSTTWMKEKVALVESSKFIYRNESIM-----PLSPFEVKVGVYNNEGEGS 788

  Fly   801 VAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEG 865
            ::...:| |||||.|..||.. |..|..|::...::|..::.....|...||::..||:|..|..
  Rat   789 LSTVSIV-YSGEDEPRLAPRG-TSVQSFSASDMEVSWNAIAWNRNTGRVLGYEVLYWTDNSKESM 851

  Fly   866 LREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGS 930
            :.:|.|.|:.....:|..:.::..:|.:.|||....||.|..::..|.:..||......|:.|.:
  Rat   852 IGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKKSPPSQPPANIAWKLSN 916

  Fly   931 SAFMLHWK--KPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGLKP-NSKYR 992
            |...|:|:  |.:....::.||||.|.        :.|:...|:.:...|..::  |.| ...|.
  Rat   917 SKLCLNWEHVKTMENESEVLGYKILYR--------QNRQSKTHVLETNNTSAEL--LVPFEEDYL 971

  Fly   993 ISITATTKMGEGS---EHYIEKTTLKDAVNVAPATPS 1026
            |.|...:..|:||   |..|.|.:...:|.|....||
  Rat   972 IEIRTVSDGGDGSSSEEIRIPKMSSLSSVGVQILKPS 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 28/74 (38%)
IG_like 57..127 CDD:214653 27/71 (38%)
Ig 135..214 CDD:299845 19/85 (22%)
IG_like 141..216 CDD:214653 18/81 (22%)
ig 251..332 CDD:278476 19/82 (23%)
I-set 339..427 CDD:254352 25/94 (27%)
Ig 354..427 CDD:299845 22/73 (30%)
I-set 432..517 CDD:254352 34/87 (39%)
Ig 446..517 CDD:299845 29/71 (41%)
I-set 522..611 CDD:254352 26/92 (28%)
ig 525..609 CDD:278476 24/87 (28%)
FN3 613..707 CDD:238020 35/101 (35%)
FN3 716..807 CDD:238020 24/97 (25%)
fn3 817..905 CDD:278470 23/87 (26%)
FN3 917..1004 CDD:238020 22/89 (25%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
Cntn6NP_037357.1 Ig strand D 76..80 CDD:409353 1/7 (14%)
Ig strand E 82..88 CDD:409353 3/5 (60%)
Ig strand F 95..104 CDD:409353 5/8 (63%)
Ig strand G 107..120 CDD:409353 3/12 (25%)
Ig 129..214 CDD:416386 20/96 (21%)
Ig strand A 130..135 CDD:409353 1/4 (25%)
Ig strand B 139..145 CDD:409353 1/5 (20%)
Ig strand C 153..159 CDD:409353 1/5 (20%)
Ig strand C' 164..166 CDD:409353 0/1 (0%)
Ig strand D 171..176 CDD:409353 1/4 (25%)
Ig strand E 179..183 CDD:409353 3/3 (100%)
Ig strand F 193..201 CDD:409353 3/10 (30%)
Ig strand G 203..214 CDD:409353 1/10 (10%)
Ig 227..315 CDD:416386 22/100 (22%)
Ig strand A 227..232 CDD:409353 0/4 (0%)
Ig strand A' 235..240 CDD:409353 1/6 (17%)
Ig strand B 243..252 CDD:409353 2/8 (25%)
Ig strand C 258..262 CDD:409353 0/3 (0%)
Ig strand C' 265..267 CDD:409353 1/1 (100%)
Ig strand D 276..279 CDD:409353 0/2 (0%)
Ig strand E 280..285 CDD:409353 1/4 (25%)
Ig strand F 293..301 CDD:409353 3/7 (43%)
Ig strand G 304..315 CDD:409353 3/18 (17%)
Ig 319..403 CDD:416386 23/87 (26%)
Ig strand A 319..322 CDD:409353 1/2 (50%)
Ig strand A' 326..330 CDD:409353 0/3 (0%)
Ig strand B 334..342 CDD:409353 2/7 (29%)
Ig strand C 348..353 CDD:409353 1/4 (25%)
Ig strand C' 355..358 CDD:409353 1/2 (50%)
Ig strand D 363..367 CDD:409353 1/3 (33%)
Ig strand E 369..374 CDD:409353 1/4 (25%)
Ig strand F 383..390 CDD:409353 3/6 (50%)
Ig strand G 394..403 CDD:409353 2/8 (25%)
Ig5_Contactin 408..496 CDD:409358 34/87 (39%)
Ig strand B 427..431 CDD:409358 1/3 (33%)
Ig strand C 440..444 CDD:409358 0/3 (0%)
Ig strand E 462..466 CDD:409358 2/3 (67%)
Ig strand F 476..481 CDD:409358 3/4 (75%)
Ig strand G 489..492 CDD:409358 0/2 (0%)
Ig 500..598 CDD:416386 29/97 (30%)
Ig strand A' 507..512 CDD:409353 0/4 (0%)
Ig strand B 515..523 CDD:409353 2/7 (29%)
Ig strand C 532..536 CDD:409353 0/3 (0%)
Ig strand E 560..564 CDD:409353 0/3 (0%)
Ig strand F 573..580 CDD:409353 3/6 (50%)
Ig strand G 587..591 CDD:409353 1/3 (33%)
FN3 598..691 CDD:238020 34/96 (35%)
FN3 703..796 CDD:238020 25/99 (25%)
FN3 805..898 CDD:238020 24/93 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..908 6/20 (30%)
FN3 903..983 CDD:214495 22/89 (25%)
Ig 26..120 CDD:416386 33/104 (32%)
Ig strand A 27..31 CDD:409353 1/3 (33%)
Ig strand A' 34..39 CDD:409353 1/4 (25%)
Ig strand B 45..53 CDD:409353 3/11 (27%)
Ig strand C 58..64 CDD:409353 3/5 (60%)
Ig strand C' 66..69 CDD:409353 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.