DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrg and rig-6

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_001022014.1 Gene:rig-6 / 173828 WormBaseID:WBGene00016354 Length:1196 Species:Caenorhabditis elegans


Alignment Length:1087 Identity:256/1087 - (23%)
Similarity:394/1087 - (36%) Gaps:237/1087 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIPKDEDRGHYQCFASNEFGTAT 121
            :.|...|.|:|..:|.||..:....:..|......| |.|::..........:.|.|.|..|...
 Worm   167 LPCTVQGNPKPTVAWYKNDVEVLSPSMSNVSYLLSG-GNLLVPASSTLAYSSFHCTARNSLGEVR 230

  Fly   122 SNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFP-SPTVNWMIQESIDGSIKSINNSR 185
            |..:.::.:.::.|:...........|.. .|.|.||...| |.|.:|:...|.|..:.  .|.|
 Worm   231 SPPILLK
PSFIDPFRPHRLDVYSLATGGA-KLDCDAPAHQPKSLTYSWLYGSSTDRILS--QNER 292

  Fly   186 MTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDVKQMGVSASQNKH-PPVRQ 249
            ..:..:|.|:||.||.||..|   ||||                     :.|.::|:.| .|..:
 Worm   293 KFISLDGTLFFSYVTAEDEDS---YACS---------------------LSVYSTQSGHYGPFFR 333

  Fly   250 YVSRRQSLA-------LRGKRMELF-------------CIYGGTPLPQTVWSK-DGQRIQWSDRI 293
            .:|....|.       |...:.::|             |....:||||..||: ||:.|.....|
 Worm   334 LISSTPKLVNSTFPPKLDSTQPQIFPEDPKVGDSIYLECFAYASPLPQYKWSRVDGKPIPARSHI 398

  Fly   294 TQGHYGKSLVIRQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVF 358
            :  :||:.|.|.:.|:.|||.|.|...|..|:|.. .:.:.:.:.|...:.........:..|.|
 Worm   399 S--NYGRVLKIEKVNYGDAGKYKCVAMNAFGSAAG-EVHVKLRAPPSILQGLHDRLVPTESNVSF 460

  Fly   359 ECRAAGVPE-PKISWIHNGKPIE----QSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGY 418
            ||..:.... ..:.|..:.|||.    .:....|..:..|.:.:....:.|:|.|.|.|:|.:|.
 Worm   461 ECLLSNADSYSSVEWFKDAKPIVPLLLPAEKRKRLKIDHNVLHLKFADETDSGVYQCVASNDVGS 525

  Fly   419 VYKDVYLNVQAEPPTISEAPAAVS----TVDGRNVTIKCRVNGSPKPLVKWLRA--SNWLTGGRY 477
            ......|.|:...|..  .|.|:|    ...|..|:|.|....||:...||..|  |.....||.
 Worm   526 SSSSALLTVKDSAPVF--PPNAMSRKVFAAFGSTVSIPCIFEASPRFHGKWADAGGSKLPQKGRI 588

  Fly   478 NVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEHTRI-----TQEPQN----YEVA 533
            . ...|.:.|:.|...|||.:.|.|.||.|:..|...|:|.....|     .:|..|    .|:.
 Worm   589 R-DEEGVISIEKVLHEDAGLFFCTAHNKLGKAHAQVQLIVVNKPSIKTNFLDEETVNMSCEVELT 652

  Fly   534 AGQSATFRCNEA------HD------DTLEIEIDWWKDG-------QSIDFEAQPRFVKTNDNSL 579
            ...||  .|.||      :|      .:|:.::...|.|       |.:|.|. |:         
 Worm   653 CENSA--ECPEALFEWKINDRPAKEYPSLKSKVHEKKSGHKGRHLKQKVDLEV-PK--------- 705

  Fly   580 TIAKTMELDSGEYTC----------VARTRLDEATARANLIVQDVPNAPKLTGITCQADKAEIHW 634
            ::|.:.::  |.:.|          |.:.:|....|   |.|:.:....|      :.....:.|
 Worm   706 SLAGSRQI--GRFACSSLYGGSSEFVTKPQLPSPIA---LTVEQMDEDGK------KKKMFRLRW 759

  Fly   635 E---QQGDNR--SP-ILHYTIQFNTSFTPASWDAAYEKVPNT---DSSFVVQMSPWANYTFRVIA 690
            .   |..|.|  || :..|.::..|. ....|.||..::...   ||..|..:.|...|.|||.:
 Worm   760 RLPPQHRDTRDHSPKVEGYLVELRTR-KNRKWRAAERQLVGNMEKDSITVENLLPNTEYQFRVRS 823

  Fly   691 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEI--EHNAPNFHYYVSW 753
            ........||..||...|.|..|.:..||:..:..:...|::.|.|: ||  |.:..|..|.|||
 Worm   824 VESAAIGEPSIPSDWVKTAPGAPSETIDNLKWRSLDSQTLLVEWQPI-EIGQESSGDNLRYRVSW 887

  Fly   754 KRDIPAAAWEN-------NNIFDWRQNNIVIADQPTFVKYL----------IKVVAINDRGESNV 801
            ..   |...:|       :|..|..:|:: .:|||..:..|          :.|..:||:|..:|
 Worm   888 SE---ATVGKNATDDMKLSNQDDDFENHL-DSDQPQAILKLNTTEGCRMVVLAVRPVNDQGNGSV 948

  Fly   802 AAEEV--VGYSGE-----------------------DRPLDAPTNFTMRQITSSTSGYMAWTPVS 841
            ..:.:  :...||                       |...|..|...::....:.||......|:
 Worm   949 GTDTIAFLNSHGELKKVSLHNVKPINASHVNISWTWDNTSDCDTKHAVQITCINLSGSEISATVA 1013

  Fly   842 EESVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSA 906
            .:.:.....|.:.:|..:.:    |:.|    |.|.:    |.|.||.: ||...    ..||| 
 Worm  1014 SDRIFWMLGGLEAETAYDCD----LKAI----DNHGS----FGPASKKF-RIHTK----QHPPS- 1060

  Fly   907 VIDFDTP-EGVPSPVQGLDAYPLGSSAFMLHW-----KKP-LYPNGKLTGYKIYYEEVKESYVGE 964
                :|| .|.....|..|.|     ..:|.|     :|| ...||  .||||:.      |:.|
 Worm  1061 ----ETPLIGKLMMKQMKDTY-----TTILEWSSIELQKPNRTENG--CGYKIFI------YISE 1108

  Fly   965 RR----EYD---PHITDPRVTRMKMAGLKPNSKYRISITATTKMGEG 1004
            ..    |.|   ..::|.|....::.|||....|.|.:......|.|
 Worm  1109 TATEAIELDMPLQRLSDRRNPSARLDGLKLMYMYTIKVAGYNPGGIG 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 16/70 (23%)
IG_like 57..127 CDD:214653 16/69 (23%)
Ig 135..214 CDD:299845 26/79 (33%)
IG_like 141..216 CDD:214653 26/75 (35%)
ig 251..332 CDD:278476 28/101 (28%)
I-set 339..427 CDD:254352 19/92 (21%)
Ig 354..427 CDD:299845 18/77 (23%)
I-set 432..517 CDD:254352 29/90 (32%)
Ig 446..517 CDD:299845 25/72 (35%)
I-set 522..611 CDD:254352 24/126 (19%)
ig 525..609 CDD:278476 22/116 (19%)
FN3 613..707 CDD:238020 24/102 (24%)
FN3 716..807 CDD:238020 27/111 (24%)
fn3 817..905 CDD:278470 18/87 (21%)
FN3 917..1004 CDD:238020 25/99 (25%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
rig-6NP_001022014.1 Ig 153..237 CDD:299845 16/70 (23%)
Ig 240..335 CDD:299845 31/121 (26%)
Ig 358..427 CDD:299845 23/70 (33%)
IG_like 363..436 CDD:214653 24/75 (32%)
I-set 441..534 CDD:254352 19/92 (21%)
IGc2 456..524 CDD:197706 16/67 (24%)
I-set 547..627 CDD:254352 26/80 (33%)
Ig 552..627 CDD:299845 25/75 (33%)
FN3 737..839 CDD:238020 27/111 (24%)
fn3 970..1047 CDD:278470 14/88 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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