DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrg and Cntn4

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:NP_446331.1 Gene:Cntn4 / 116658 RGDID:621361 Length:1026 Species:Rattus norvegicus


Alignment Length:1019 Identity:294/1019 - (28%)
Similarity:451/1019 - (44%) Gaps:118/1019 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITIP 101
            |..::|.:..:.|:..    :.||..|.|:|...|..||...| ...|.|.  ....|:|:|..|
  Rat    32 PSHVMFPLDSEEKKVK----LSCEVKGNPKPHIRWKLNGTDVD-IGMDFRY--SVVEGSLLINNP 89

  Fly   102 -KDEDRGHYQCFASNEFGTATSNSVYVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPT 165
             |.:|.|.|||.|:|.|||..|....::.|.|..||.....|:....|:..:|.|..|......:
  Rat    90 NKTQDSGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELS 154

  Fly   166 VNWMIQESIDGSIKSINNSRMTLDPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLL 230
            ..|:..|.....    :|.|......|||:.:.|.:.|..:   |.|..|:...|...:|....|
  Rat   155 YAWIFNEHPSYQ----DNRRFVSQETGNLYIAKVEKADVGN---YTCVVTNTVTSHQVLGPPTPL 212

  Fly   231 DVKQMGVSASQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSK-DGQRIQWSDRIT 294
            .::..||   ..::.|..:........|.:|..::|.|...|.|:|..:|.: ||:.|....|  
  Rat   213 ILRNDGV---MGEYEPKIEVQFPETVPAEKGSTVKLECFALGNPVPTILWRRADGKPIARKAR-- 272

  Fly   295 QGHYGKSLVIRQTNF--DDAGTYTCDVSNGVGNAQSFSIILNV--NSVPYFTKEPEIAT-----A 350
              .:..|.::...||  :|||:|.|...|..|.        |:  ..|.::.:...:..     .
  Rat   273 --RHKSSGILEIPNFQQEDAGSYECVAENSRGK--------NIAKGQVTFYAQPNWVQIINDIHV 327

  Fly   351 AEDEEVVFECRAAGVPEPKISWIHNGKP--------IEQSTPNPRRTVTDNTIRIINLVKGDTGN 407
            |.:|.|.:||:|.|.|:|...|:.||.|        |||.|.|         |.|:||  .|.|.
  Rat   328 AMEESVFWECKANGRPKPTYRWLKNGDPLLTRERIQIEQGTLN---------ITIVNL--SDAGM 381

  Fly   408 YGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTV--DGRNVTIKCRVNGSPKPLVKWLRASN 470
            |.|.|.|..|.:|....|:|.||.|..|.......|:  .|..|.|:|:...||:|:..|.:...
  Rat   382 YQCVAENKHGVIYASAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRKGRE 446

  Fly   471 WL-TGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGEIQADGSLVVKEHTRITQEPQNYEVAA 534
            .| ...|..:..:|:|.|.:||.||||.|||.|.|.||...:.|::|||:.|::...|.:.:|..
  Rat   447 ILRENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVVVKDPTKVMVPPSSMDVTV 511

  Fly   535 GQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDN-----------SLTIAKTMELD 588
            |:|....|...||.:|:|...|..:|..|||:      |..|:           .|.|.......
  Rat   512 GESIVLPCQVTHDHSLDIVFTWTFNGHLIDFD------KDGDHFERVGGQDSAGDLMIRNIQLKH 570

  Fly   589 SGEYTCVARTRLDEATARANLIVQDVPNAPKLTGITCQAD-KAEIHWEQQGDNRSPILHYTIQFN 652
            :|:|.|:.:|.:|:.:|.|:|||:..|..|:...|....| .|::.|....||.|||..|.||..
  Rat   571 AGKYVCMVQTSVDKLSAAADLIVRGPPGPPEAVTIDEITDTTAQLSWRPGPDNHSPITMYVIQAR 635

  Fly   653 TSFTPASWDAAYEKVP-----NTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDV 712
            |.|: ..|.|. ..||     .|.::.||.::||..|.||.:|.|.||...||..|:...|:..:
  Rat   636 TPFS-VGWQAV-STVPELVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEAL 698

  Fly   713 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVS--------WKRDIPAAAWENNNIFD 769
            |...|.||.|.|...:.|||:|..:||...|...|.|.|:        |...:.|:|..:..:| 
  Rat   699 PEVTPANVSGGGGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKMIWMLTVLASADASRYVF- 762

  Fly   770 WRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSGY 834
              :|..|   :| |..:.:||...|::||...:...:| ||.|:.|...|.:...|.: |:|...
  Rat   763 --RNESV---RP-FSPFEVKVGVFNNKGEGPFSPTTLV-YSAEEEPTKPPASIFARSL-SATDIE 819

  Fly   835 MAW-TPVSEESVRGHFKGYKIQTWTENEGEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNG 898
            :.| :|:.:.  ||..:||:::.|..::.||..|:|...|:..:..:|..|.::..:..:.|||.
  Rat   820 VFWASPIGKN--RGRIQGYEVKYWRHDDKEENARKIRTVGNQTSTKITNLKGNALYHLSVKAYNS 882

  Fly   899 RFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAFMLHWK--KPLYPNGKLTGYKIYYEEVKESY 961
            ...||.||.::..|.:..||...|...:....|..:|:|.  |.|....::.|||:.|.      
  Rat   883 AGTGPSSAAVNVTTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYR------ 941

  Fly   962 VGERREYDPHITDPRVTRMKMAGLKPNSKYRISITATTKMGEGS 1005
              ..|:....:.:...|.:::: |..:..|.|.|...:..|:||
  Rat   942 --WNRQSSTSVIETNKTSVELS-LPFDEDYIIEIKPFSDGGDGS 982

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 27/73 (37%)
IG_like 57..127 CDD:214653 27/70 (39%)
Ig 135..214 CDD:299845 18/78 (23%)
IG_like 141..216 CDD:214653 16/74 (22%)
ig 251..332 CDD:278476 22/83 (27%)
I-set 339..427 CDD:254352 31/100 (31%)
Ig 354..427 CDD:299845 30/80 (38%)
I-set 432..517 CDD:254352 30/87 (34%)
Ig 446..517 CDD:299845 27/71 (38%)
I-set 522..611 CDD:254352 26/99 (26%)
ig 525..609 CDD:278476 25/94 (27%)
FN3 613..707 CDD:238020 35/99 (35%)
FN3 716..807 CDD:238020 28/98 (29%)
fn3 817..905 CDD:278470 23/88 (26%)
FN3 917..1004 CDD:238020 19/88 (22%)
FN3 1041..1111 CDD:238020
Bravo_FIGEY 1155..>1221 CDD:290593
Cntn4NP_446331.1 Ig 25..114 CDD:299845 30/88 (34%)
I-set 26..117 CDD:254352 30/91 (33%)
Ig 120..213 CDD:299845 22/99 (22%)
IG_like 130..204 CDD:214653 18/80 (23%)
Ig 225..313 CDD:299845 25/99 (25%)
IG_like 232..311 CDD:214653 23/90 (26%)
I-set 316..401 CDD:254352 31/95 (33%)
Ig 318..401 CDD:299845 31/93 (33%)
IG_like 415..494 CDD:214653 28/78 (36%)
Ig5_Contactin_like 422..494 CDD:143170 27/71 (38%)
IG_like 504..593 CDD:214653 26/94 (28%)
Ig6_Contactin-4 513..597 CDD:143261 25/89 (28%)
FN3 597..690 CDD:238020 34/94 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..710 9/24 (38%)
FN3 703..792 CDD:238020 28/95 (29%)
FN3 804..896 CDD:238020 25/94 (27%)
FN3 904..989 CDD:238020 19/88 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3513
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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