DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrg and nfasc

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_004910753.1 Gene:nfasc / 100485986 XenbaseID:XB-GENE-922969 Length:1338 Species:Xenopus tropicalis


Alignment Length:1339 Identity:394/1339 - (29%)
Similarity:611/1339 - (45%) Gaps:194/1339 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILAALLVALLCAGSAESKGN------RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQP 65
            :|..|.:.|:|........|      :||.|.||.|...::       ...|| .:|||||.|.|
 Frog    26 VLLLLFLHLVCTIKVPLDPNIQRDLIQPPTIIKQSAKNYIV-------DPRDN-ILIECEAQGNP 82

  Fly    66 EPEYSWIKNGKKFDWQAYDNRMLRQPGRGTLVITI-----PKDEDRGHYQCFASNEFGTATSNSV 125
            .|.:||.||||.:: .|.|.|:..:...|||.|.|     |:|.: |.|||.|.|:.|||.||.:
 Frog    83 YPMFSWTKNGKFYN-VAKDPRVSFRRRSGTLEIEIHGGGRPEDYE-GEYQCSARNQHGTALSNKI 145

  Fly   126 YVRKAELNAFKDEAAKTLEAVEGEPFMLKCAAPDGFPSPTVNWM--IQESIDGSIKSINNSRMTL 188
            .::.:....:..|....:...||...:|:|..|.|.|.|.:.||  :.|.|      :.:.|::.
 Frog   146 LLQVSRSPLWPKENLDPVVVNEGAFLILQCNPPHGLPPPVIFWMSSLMEPI------VQDKRVSQ 204

  Fly   189 DPEGNLWFSNVTREDASSDFYYACSATSVFRSEYKIGNKVLLDV--------------KQMGVSA 239
            ...|:|:||||.|:|..:|  |:|:|.|.|....:..|...|.|              ...|.|:
 Frog   205 GLNGDLYFSNVLRQDTQTD--YSCNARSHFTHTIQQKNPYTLKVLTTRGVPERTPTFLLPTGTSS 267

  Fly   240 SQNKHPPVRQYVSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVI 304
            |:               |.||.:.:.|.||..|.|.|..:|.|.|..:. |.::...::.|:|.|
 Frog   268 SK---------------LVLRDEDLLLECIASGVPTPDIMWYKKGGELP-SRKLKFENFNKTLRI 316

  Fly   305 RQTNFDDAGTYTCDVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPK 369
            ...:.:|:|.|.|..||.:|:.: .:|.:.|.:.||:..||:....|..|.....|||:|.|:|.
 Frog   317 IGVSEEDSGEYFCQASNKMGSIR-HTISVRVKAAPYWLDEPKNLILAPGENGRLVCRASGSPKPT 380

  Fly   370 ISWIHNGKPIEQSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPP-T 433
            |.|..||...|...|||...:..:||....:..|::..|.|||:|..||:..:.::::...|. .
 Frog   381 IQWFMNGDATEVGAPNPNFEIAGDTIIFREVQSGNSAVYQCNASNEHGYLLANAFVSILDVPSRM 445

  Fly   434 ISEAPAAVSTVDGRNVTIKCRVNGSPKPLVKWLR---ASNWLTGGRYNVQANGDLEIQDVTFSDA 495
            :......:..::.....:.|...|||.|.::|.:   .|| |.||.|.|..||.|||..|...|.
 Frog   446 LGPRNQLIRVIEYNRTQLDCPFFGSPIPTLRWFKNGQGSN-LDGGNYRVHENGTLEINTVRKEDQ 509

  Fly   496 GKYTCYAQNKFGEIQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDG 560
            |||||.|.|..|..:....|.|||.|||.:.|::.....|.|....|....|.:|.:.:.|.||.
 Frog   510 GKYTCVATNILGNAENTVRLEVKEPTRIVKGPEDQIAKRGSSVHLDCRVRSDSSLRLTVTWIKDD 574

  Fly   561 QSIDFEAQPRFVKTNDNSLTIAKTMELDSGEYTCVARTRLDEATARANLIVQ------------- 612
            ..:...::   :|.:::.|||....|.|.|.|||||:|.||:.:::|.|.:|             
 Frog   575 TQLYINSR---MKKDEDGLTIFGVAEKDQGAYTCVAKTELDQDSSKAYLTIQETSSPTSRLTSQL 636

  Fly   613 -DVPNAPKLTGITCQADKA-EIHWEQQGDNRSPILHYTIQFNTS-FTPASWDAAYEKVPNTDSSF 674
             |.|:.|:...:|..:.:: .:.|....||.|||..:.:||... ..|.:|. ....||...:|.
 Frog   637 IDKPDPPQDLELTEPSVRSVRLTWVPGDDNNSPITGFIVQFEEDRHQPGTWH-NLASVPANVNSV 700

  Fly   675 VVQMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPE 739
            ::|:||:.||.|||:|.|::|:|.||..|:...|....|..||.:|.|.||..||:.|:|||:..
 Frog   701 ILQLSPYVNYQFRVLALNELGSSMPSPSSERFQTAGAPPETNPGDVKGAGTSKNNMEITWTPLNS 765

  Fly   740 IEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAE 804
            .:...||..|.|.|::......|.|..::|   |..|:.:.|.:.:|.::|.|.|:.|:: ....
 Frog   766 TQAYGPNLRYNVKWRQRHTGEPWSNITVWD---NKHVVWNTPVYTQYELRVQAENEFGKA-PEPS 826

  Fly   805 EVVGYSGEDRPLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTWTENEGEEGL--- 866
            .::||||||.|..|||:..:| :.:||:..:.||.|:..|::|....|:...|.|:...:|:   
 Frog   827 TMIGYSGEDYPKAAPTDIKLR-VMNSTAISLQWTRVAPASIQGSLLEYRAYFWRESSLLKGVWVS 890

  Fly   867 ---REIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPL 928
               ::....||....:|:|..|.|.....::|.|||.:||.|.|.:|.|||||||..:....|..
 Frog   891 RKKQQQSFMGDRVRGIVSQLIPYSIYKLYLVAVNGRGDGPKSDVKEFTTPEGVPSAPKYFRVYEP 955

  Fly   929 GSSAFMLHWKKPLYPNGKLTGYKIYYEEVKESYVGE---------RREYDPHITDPRVTRMKMAG 984
            .....::.|..|.:|||.||.|.:..:....:..|:         :.:|....||          
 Frog   956 NREMIVVEWGHPEHPNGNLTAYNLRIQPFNGTRTGKAVFETLSRNQTKYTLQRTD---------- 1010

  Fly   985 LKPNSKYRISITATTKMGEGSEHYIEKTTLKDAVNVAPATPSFSWEQLPSDNGLAKFRINWLPST 1049
              |.|:||.:|.|.|::|.|     |..|.:..|.:...:|:....:.|:....|...:..:|.|
 Frog  1011 --PVSRYRFAINARTQVGAG-----EVITAESPVRLDEVSPTSVSSKSPAPVTDAPTEVPTIPPT 1068

  Fly  1050 EGH----------------------------------------------PGTHFFT---MHRIKG 1065
            ...                                              |.|::..   ||.::.
 Frog  1069 SSGATTLLATTSTTSVTTTTAGTESSLVAITRIPNIATTGPSLWNLTALPNTYWANITWMHNLEP 1133

  Fly  1066 ETQWIRENEEKNSDYQEVG-----------GLDPETAYEFRVVSVDGHFNTESATQEIDTNTVEG 1119
            .:.::.|..:.|:..:.|.           .|.|...|..||.|.: |.:..|.....||::.  
 Frog  1134 GSVFMVEYTDSNNTVKTVPVKAHVPSIQLFDLVPGMTYRVRVYSQE-HPSVTSLYVTFDTSSA-- 1195

  Fly  1120 PIMVANET-VANAGWFIGMMLALAFIIILFIIICIIRRNRGGKYDVHD-RELANGRRDYPEEGGF 1182
              ...|:. :|..|||||:|.|:|.::::.:|:|.|:|:|||||.|.: :|:|.|..|..|..|.
 Frog  1196 --YTKNQVDIATQGWFIGLMCAVALLVLILLIVCFIKRSRGGKYPVREKKEVALGPDDNKEGDGS 1258

  Fly  1183 HEYSQPLDNKS-AGRQSVSSANKPGVESDTDSMAEYGDG 1220
            .:||.. |||. .|.|:.........||| ||:.:||:|
 Frog  1259 FDYSDE-DNKPLQGSQTSLDGTIKQQESD-DSLVDYGEG 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 35/77 (45%)
IG_like 57..127 CDD:214653 35/74 (47%)
Ig 135..214 CDD:299845 25/80 (31%)
IG_like 141..216 CDD:214653 25/76 (33%)
ig 251..332 CDD:278476 23/80 (29%)
I-set 339..427 CDD:254352 30/87 (34%)
Ig 354..427 CDD:299845 25/72 (35%)
I-set 432..517 CDD:254352 29/88 (33%)
Ig 446..517 CDD:299845 29/73 (40%)
I-set 522..611 CDD:254352 28/88 (32%)
ig 525..609 CDD:278476 25/83 (30%)
FN3 613..707 CDD:238020 32/95 (34%)
FN3 716..807 CDD:238020 28/90 (31%)
fn3 817..905 CDD:278470 27/93 (29%)
FN3 917..1004 CDD:238020 23/95 (24%)
FN3 1041..1111 CDD:238020 17/129 (13%)
Bravo_FIGEY 1155..>1221 CDD:290593 28/68 (41%)
nfascXP_004910753.1 IG_like 62..149 CDD:214653 37/96 (39%)
Ig 72..148 CDD:299845 35/77 (45%)
Ig 153..245 CDD:299845 29/99 (29%)
IG_like 162..246 CDD:214653 29/91 (32%)
IG_like 266..346 CDD:214653 26/96 (27%)
Ig3_L1-CAM_like 277..347 CDD:143208 21/71 (30%)
IG_like 356..438 CDD:214653 27/81 (33%)
Ig 364..439 CDD:299845 25/74 (34%)
IGc2 462..521 CDD:197706 27/59 (46%)
IG_like 463..531 CDD:214653 29/68 (43%)
I-set 536..622 CDD:254352 28/88 (32%)
Ig 551..622 CDD:299845 24/73 (33%)
FN3 640..730 CDD:238020 30/90 (33%)
FN3 742..820 CDD:214495 27/80 (34%)
fn3 840..932 CDD:278470 27/92 (29%)
FN3 944..1035 CDD:238020 26/107 (24%)
fn3 1109..1178 CDD:278470 12/68 (18%)
Bravo_FIGEY 1230..1314 CDD:290593 28/68 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9772
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 579 1.000 Inparanoid score I1016
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D208655at33208
OrthoFinder 1 1.000 - - FOG0000777
OrthoInspector 1 1.000 - - otm48163
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X532
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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