DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrg and nrcam

DIOPT Version :9

Sequence 1:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster
Sequence 2:XP_031753581.1 Gene:nrcam / 100216214 XenbaseID:XB-GENE-489769 Length:1325 Species:Xenopus tropicalis


Alignment Length:1364 Identity:409/1364 - (29%)
Similarity:632/1364 - (46%) Gaps:180/1364 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RPPRITKQPAPGELLFKVAQQNKESDNPFIIECEADGQPEPEYSWIKNGKKFDWQAYDNRMLRQP 91
            :||.||.|.....::     ..:||   .:|:|||.|:|.|.:||.:||..||... |..:..:.
 Frog    39 QPPTITHQSPKNYIV-----DPRES---IVIQCEAKGKPPPSFSWTRNGTHFDIDK-DPYVTMKQ 94

  Fly    92 GRGTLVITIPK----DEDRGHYQCFASNEFGTATSNSVYVRKAE-LNAFK-----------DEAA 140
            ..|||||....    :...|.|||.|.|:.|:|.||::.||::. ||..|           .|..
 Frog    95 NSGTLVINTMNGARVEAYEGEYQCTARNDRGSALSNNIVVRQSNILNIIKAILLEGSPLWTKEKI 159

  Fly   141 KTLEAVEGEPFMLKCAAPDGFPSPTVNWMIQESIDGSIKSI-NNSRMTLDPEGNLWFSNVTREDA 204
            :.:...:|.|.:|.|..|.|.|.|.:.||     |.|.:.: .|.|::....|:|:||||..|| 
 Frog   160 EPIVIQQGVPLVLPCNPPKGLPPPIIFWM-----DNSFQKLPQNKRVSQGLNGDLYFSNVQPED- 218

  Fly   205 SSDFY--YA-CSATSVFRSEYKIGNKV-------------LLDVKQMGVSASQNKHPPV---RQY 250
            :.|||  || .:.|.....:..|..||             |.|.:..|.|.:..:.|.:   ...
 Frog   219 TRDFYICYARFNLTQTIHQKQPISLKVLSMDGLNETIAANLSDTEFYGDSPAGERRPSMLFPNNT 283

  Fly   251 VSRRQSLALRGKRMELFCIYGGTPLPQTVWSKDGQRIQWSDRITQGHYGKSLVIRQTNFDDAGTY 315
            .|.:  ..|.|:.:.|.||..|.|.|:..|.|:...:. ::|:...::.|:|.|......|||.|
 Frog   284 TSNK--TVLLGEVLLLECIAEGLPTPEIHWRKESADLP-ANRVFYENFNKTLKIIDVTEADAGKY 345

  Fly   316 TCDVSNGVGNAQSFSIILNVNSVPYFTKEPEIATAAEDEEVVFECRAAGVPEPKISWIHNGKPIE 380
            .|...|.:|..... |.:.|.:.||:...|.....:..|:....|||:|.|.|.|:|:.||..||
 Frog   346 KCIGRNILGTTHHI-ITVTVKAAPYWITPPRNIVLSPGEDGSLTCRASGSPTPSITWLINGVSIE 409

  Fly   381 QSTPNPRRTVTDNTIRIINLVKGDTGNYGCNATNSLGYVYKDVYLNVQAEPPTISEAPAAVSTVD 445
            .:..:..|.|..:||....:..|.|..|.|||:|..||:..:.::||.||||.|..:......:.
 Frog   410 LAPTDASRRVDGDTIMFSKVQDGATAVYQCNASNKYGYLLANAFVNVIAEPPRIMMSKHVYKVIA 474

  Fly   446 GRNVTIKCRVNGSPKPLVKWLRASNW--LTGGRYNVQANGDLEIQDVTFSDAGKYTCYAQNKFGE 508
            .....:.|...|||||.:||.:.::.  |.|..|....||.|||.......:|.|||.|.|.||.
 Frog   475 NNVALLHCPFFGSPKPEIKWFKGAHGSVLHGNGYVFHDNGTLEIPVAQKDSSGNYTCVATNSFGS 539

  Fly   509 IQADGSLVVKEHTRITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVK 573
            ::....|.:|:.|.|.::|:...:....||.|.|...||.||:..:.|.||  :.:.....|| |
 Frog   540 VKDMIGLQIKDPTMIIKQPEYRVIQRYGSAHFECRVKHDPTLKPVVIWLKD--NTELPNDERF-K 601

  Fly   574 TNDNSLTIAKTMELDSGEYTCVARTRLDEATARANL----------IVQDVPNAPKLTGITCQAD 628
            .....|||....|.|.|.|||||.|.||..:|.|.|          |..|.|:.|....:|...:
 Frog   602 VTKGHLTIKNVTEKDEGTYTCVANTDLDTVSASAVLTVVEATPTPAIFYDRPDHPFDLELTDHLE 666

  Fly   629 KA-EIHWEQQGDNRSPILHYTIQF-NTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAF 691
            :: ::.|....||.|||.::.|:: :|...|.:|. ...||..|.::..:.:||:.||:|||||.
 Frog   667 RSVQLSWVPGDDNNSPITNFIIEYEDTMHDPGTWH-FLTKVSGTQTTARLNLSPFVNYSFRVIAV 730

  Fly   692 NKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRD 756
            |:.|.|.||..|:...|:|..|.|||..|.|.||||:||||:|..:...:.|.|...|.|||:: 
 Frog   731 NEFGRSEPSESSEQYMTKPAEPDKNPSGVKGVGTEPDNLVIAWESIKGFDSNGPGLQYKVSWRQ- 794

  Fly   757 IPAAAWENNNIFDWRQNNIVIAD--------QPTFVKYLIKVVAINDRG---ESNVAAEEVVGYS 810
                     ..||....:|::|:        .|||..|.|||.|:||.|   :.:|    |:|||
 Frog   795 ---------KDFDDEWTSIIVANVSKYIVSGTPTFEPYEIKVQALNDIGYAPDPSV----VIGYS 846

  Fly   811 GEDRPLDAPTNFTMRQITSSTSGYMAWTPVSEESVRGHFKGYKIQTW-TENEGEEGLREIHVK-- 872
            |||.|:.||:|..: ::.::|...:.|..|...|:|||.:||::..| .||..:...|.:..:  
 Frog   847 GEDLPMTAPSNVEL-EVINNTLAKVQWDSVPSTSIRGHLQGYRVYYWKAENHTKRNKRHMEKRML 910

  Fly   873 ---GDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDFDTPEGVPSPVQGLDAYPLGSSAFM 934
               |:..:.::...:|.:.....:..:||:..||||....|:|||||||....||.......:..
 Frog   911 TFHGNKTHGMLPGLEPYTSYILNVRVFNGKGEGPPSTDKYFETPEGVPSAPLKLDVVERTIESLT 975

  Fly   935 LHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDP--HITDP-RVTRMKMAGLKPNSKYRISIT 996
            |.||.|.:|||.||.|.:.::.:..::     |..|  .||.| ..|.:.:..|..:::|:..:.
 Frog   976 LMWKPPAHPNGVLTHYTLIFQSINATH-----ELSPPVEITVPTNETSLVLRNLNQSTRYKFYLY 1035

  Fly   997 ATTKMGEGSEHYIEKTTLKDAVNVAPATPSFSWEQL----PSDNGLAKF---------RINWLPS 1048
            |.|.:|.|.:...|..|:.|...:.|.......|.|    |:.:.::..         ||..:.|
 Frog  1036 AHTVVGPGIQITQEAITVLDQAGIPPPAVGTGKEPLSATSPAMHTVSPTHYKVRPILPRIKNITS 1100

  Fly  1049 TEGH---------PGTHFFTMHRIKGETQWIRENEEKNSDYQEVGGLDPETAYEFRVVSVDGHFN 1104
            .|..         |...|:..:....:..|.:|.......:..:.||.|.|:|:.|||:  ..|:
 Frog  1101 AETSATIIWDYEGPEVKFYIKYVEISKEDWKKEFVNDTRSFYVLKGLTPGTSYKVRVVA--DEFS 1163

  Fly  1105 TESATQEIDTNTVEGPIMVANET-VANAGWFIGMMLALAFIIILFIIICIIRRNRGGKYDVHDRE 1168
            ....:::   :...||.|.:.:. :|..|||||:|.|:|.:|::.:|||.||||:||||.|.::|
 Frog  1164 DYGVSED---SFQTGPAMASRQVDIATQGWFIGLMCAVALLILVLLIICFIRRNKGGKYPVKEKE 1225

  Fly  1169 LANGRRDY----PEEGGFHEYSQPLDNKSAGRQSVSSANKPGVESDT-DSMAEYGDGDTAVATAA 1228
            .|:...:.    .::|.|.|||...|:|...:.|.:.:::...:.|: ||:.:||:|        
 Frog  1226 DAHADPEIQPMKEDDGTFGEYSDAEDHKPLKKGSRTPSDRTVKKDDSDDSLVDYGEG-------- 1282

  Fly  1229 ARAAAAARSKLTSLPTSTQQQQQQQ---QQQQQQQEQPQSTSASTVPLISLASPSPSPSSTSNS 1289
                           .:.|..:...   |...:::::|...:.|        |.:|||.:..||
 Frog  1283 ---------------VNGQFNEDGSFIGQYSGKKEKEPVEGNES--------SEAPSPVNAMNS 1323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NrgNP_001245581.1 Ig 55..128 CDD:299845 29/76 (38%)
IG_like 57..127 CDD:214653 29/73 (40%)
Ig 135..214 CDD:299845 29/93 (31%)
IG_like 141..216 CDD:214653 27/78 (35%)
ig 251..332 CDD:278476 22/80 (28%)
I-set 339..427 CDD:254352 29/87 (33%)
Ig 354..427 CDD:299845 26/72 (36%)
I-set 432..517 CDD:254352 27/86 (31%)
Ig 446..517 CDD:299845 25/72 (35%)
I-set 522..611 CDD:254352 33/98 (34%)
ig 525..609 CDD:278476 31/83 (37%)
FN3 613..707 CDD:238020 32/95 (34%)
FN3 716..807 CDD:238020 35/101 (35%)
fn3 817..905 CDD:278470 22/93 (24%)
FN3 917..1004 CDD:238020 25/89 (28%)
FN3 1041..1111 CDD:238020 17/87 (20%)
Bravo_FIGEY 1155..>1221 CDD:290593 23/70 (33%)
nrcamXP_031753581.1 Ig 41..135 CDD:416386 35/102 (34%)
Ig strand A 41..45 CDD:409353 2/3 (67%)
Ig strand A' 50..54 CDD:409353 0/8 (0%)
Ig strand B 59..66 CDD:409353 3/6 (50%)
Ig strand C 72..77 CDD:409353 2/4 (50%)
Ig strand C' 80..82 CDD:409353 0/1 (0%)
Ig strand D 89..92 CDD:409353 0/2 (0%)
Ig strand E 97..101 CDD:409353 3/3 (100%)
Ig strand F 114..122 CDD:409353 5/7 (71%)
Ig strand G 125..135 CDD:409353 4/9 (44%)
Ig 156..246 CDD:416386 31/95 (33%)
Ig strand A 156..159 CDD:409353 1/2 (50%)
Ig strand A' 161..165 CDD:409353 0/3 (0%)
Ig strand B 168..176 CDD:409353 3/7 (43%)
Ig strand C 183..189 CDD:409353 3/10 (30%)
Ig strand C' 192..195 CDD:409353 0/2 (0%)
Ig strand D 201..205 CDD:409353 0/3 (0%)
Ig strand E 207..211 CDD:409353 2/3 (67%)
Ig strand F 222..230 CDD:409353 4/7 (57%)
Ig strand G 233..246 CDD:409353 2/12 (17%)
Ig 299..365 CDD:416386 19/67 (28%)
Ig strand C 308..312 CDD:409353 0/3 (0%)
Ig strand E 330..334 CDD:409353 2/3 (67%)
Ig strand F 344..349 CDD:409353 2/4 (50%)
Ig strand G 357..360 CDD:409353 0/3 (0%)
Ig 369..457 CDD:416386 29/87 (33%)
Ig strand B 385..389 CDD:409353 0/3 (0%)
Ig strand C 398..402 CDD:409353 1/3 (33%)
Ig strand E 422..426 CDD:409353 2/3 (67%)
Ig strand F 436..441 CDD:409353 2/4 (50%)
Ig strand G 449..452 CDD:409353 0/2 (0%)
Ig strand A' 469..472 CDD:409353 0/2 (0%)
IGc2 478..538 CDD:197706 22/59 (37%)
Ig strand B 478..485 CDD:409353 1/6 (17%)
Ig strand C 491..496 CDD:409353 2/4 (50%)
Ig strand C' 498..500 CDD:409353 0/1 (0%)
Ig strand D 507..511 CDD:409353 1/3 (33%)
Ig strand E 514..519 CDD:409353 3/4 (75%)
Ig strand F 527..535 CDD:409353 5/7 (71%)
Ig 554..639 CDD:416386 33/87 (38%)
Ig strand A 555..558 CDD:409353 0/2 (0%)
Ig strand A' 560..564 CDD:409353 0/3 (0%)
Ig strand B 567..576 CDD:409353 4/8 (50%)
Ig strand C 584..589 CDD:409353 1/4 (25%)
Ig strand C' 592..595 CDD:409353 0/2 (0%)
Ig strand D 599..604 CDD:409353 3/5 (60%)
Ig strand E 605..611 CDD:409353 3/5 (60%)
Ig strand F 618..626 CDD:409353 6/7 (86%)
Ig strand G 629..639 CDD:409353 4/9 (44%)
FN3 653..743 CDD:238020 30/90 (33%)
fn3 756..837 CDD:394996 33/90 (37%)
FN3 854..953 CDD:238020 25/99 (25%)
fn3 959..1043 CDD:394996 24/88 (27%)
FN3 1090..1171 CDD:238020 17/85 (20%)
Bravo_FIGEY 1212..1297 CDD:404722 25/107 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9772
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21041
Inparanoid 1 1.050 579 1.000 Inparanoid score I1016
OMA 1 1.010 - - QHG47974
OrthoDB 1 1.010 - - D208655at33208
OrthoFinder 1 1.000 - - FOG0000777
OrthoInspector 1 1.000 - - otm48163
Panther 1 1.100 - - LDO PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X532
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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